<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27123
Description |
Mediator of RNA polymerase II transcription subunit 26 |
Sequence | MITPRPSNPPVGAPLRRTVEQRQAHGVVDIRAVVDVISTLEKTTVTKEALEITRLGKHINELRRKTSNEALAKRAKDLVRRWRDMVLPTVHSTSSQPTLALNGAKEMALRNLKPQSPALRELKPHSPLSLKDATPLRVLSPALSVHSDHSRSPNASSNNKQSITLTSNHRISSCSRNASPVLGTSNQNHVTEAVPRTHSSNKRLRKEESSKDQCQYYQSPLGTESTIEEVKKQRLNGENISGNLNSQVPSPTLKERISDCFAETSLETTNDESGPKKRGRKKGSKSAKRQSFLEDSVKEKLASISRNPKLKTTQELLADLQARGSNCSPIGSANALPSQSVAEPPSTEDVLRGNNEQVFKHLRCSSQKNSQSLHRSGLPSETSTGKTQKAARLRAAENCRESSSPESCQDRLREDDRISGTIETLTCRSPLQRDLTVEEILAKLPPLDPSSIDWGEEEERDDAECFPPPRDATAEDLERLHMQCIEGLNGNFQPRLSMATACSDGDERSNARDGGNGVSSRLSNMDSVKSVHNNQTDNVEFREWHQMLARPSYQGEILNIMPYVIID |
Length | 567 |
Position | Unknown |
Organism | Acromyrmex echinatior (Panamanian leafcutter ant) (Acromyrmex octospinosus echinatior) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota>
Neoptera> Endopterygota> Hymenoptera> Apocrita> Aculeata> Formicoidea>
Formicidae> Myrmicinae> Acromyrmex.
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Aromaticity | 0.02 |
Grand average of hydropathy | -0.840 |
Instability index | 66.98 |
Isoelectric point | 8.85 |
Molecular weight | 62736.40 |
Publications | PubMed=21719571
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP27123
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
5| 206.50| 35| 83| 154| 188| 1
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107- 149 (33.40/12.58) MALRN.LKpQSPALRE.LKPHSPLSlKDAtplrvlSPALSV.HSDH
154- 188 (59.62/27.49) NASSN.NK.QSITLTS.NHRISSCS.RNA......SPVLGT.SNQN
196- 228 (41.26/17.05) RTHSS.NK.RLRKEES.SK..DQCQ.YYQ......SP.LGTeSTIE
239- 272 (43.86/18.53) NISGNlNS.QVPSPTL.KERISDCF.AET......S..LET.TNDE
283- 312 (28.35/ 9.71) GSKSA.KR.QSFLEDSvKEKLASIS.RN........PKLKT.....
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 67.19| 20| 41| 405| 430| 2
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405- 430 (27.50/32.24) PESCqDRLREDDRisgtiETLTCRSP
449- 468 (39.69/25.04) PSSI.DWGEEEER.....DDAECFPP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 73.35| 23| 26| 472| 497| 3
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472- 497 (32.13/27.52) ATAEDLERLHMQciEGLNGnFQPRLS
501- 523 (41.23/22.70) ACSDGDERSNAR..DGGNG.VSSRLS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.50| 30| 40| 327| 366| 6
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327- 366 (41.42/40.16) CSPIGSANALPSQSvaeppSTEDV.....LRGNNEqvfkhLRCSS
369- 403 (46.08/22.83) NSQSLHRSGLPSET.....STGKTqkaarLRAAEN.....CRESS
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