<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27106
Description |
Mediator of RNA polymerase II transcription subunit 24 |
Sequence | METKVTSKTSSLKALLLRAWRERWTDLQWGINIKTILPRGVSGDVYNLADYILQQALVGPGPNQLVLSYLKHSLSSQLVSYAAVLQRISKYDAFHKPHCIVSLLEFLESIQVGITCRGKPEEDLLAAAVLSIVHWLLQCYLHTLTKTPQSNPLTPHPSELVDKPASILQQMLNSDFLCAMMYLAKYDDKDLYIEVVKKCQEIETLLKTSTQKSVVPIEDSLKKLCNLEIESLCPEKTKMESITHCLQPLFAVQVLLNPSTETTVFVNQLLMVQRLKSYTNARLYCEIIRACLMCLHNVTGTFKESQWGAFTFLKVPHILKELHVTNLNGDEKFEYSQDILDAFELLLQFTPLLDIMDTTCSCNYVECLLNELQKVNLVTEKQAKQIGARREGATTTSSIPKVIVRAGQTLNGILRTLNADYAKIQEGLLSVLYQVLTGKSFELMLAVATVEGELKTFVTKLIKFNECSKQINEPVPDKTAATRAMLFDVSFLMLCSIVQTYGSDVVLEEGGDSFFEQWVRECMPERNKLKSPQRMLQSVDSARVDALLAQINSPDPDFKSSNLKWHVACQSAMGAVKELLCAWESGVLGAGDVKRALDGLRATACCLPVCAAAWLCAYMSITHQDALLKPMNMVQHFLTPLSGDEMQDNLKDRSSLMVQIIRKMQYDVHPPTQSKTKVLSMSHSIISRQPILEQLESVWQNINQRGWINIQATQSLESLLNTGGSLWFVTNIVKEVLKYRYQEELDQAVDLAFAVFHLDIENCTLDLINHIIPQYLHNSMQSDELVEPQSSILAKLCVYCIFSTLEYNNSNPYRGNSRKRVRRDLDTDDLDALGVSNKLLRLNETGENVPMFSSQSPQAQGSSNGQKSVVILRDPLMTALNNLFTIFAFLAGRDGEVSQQTHFILQFLRLMVQCGKDRTRIVLQGMSQTLVPCLLKALPELFTTDILLRLYDIQTMIGRKATARDLCMLRNINLKPTK |
Length | 978 |
Position | Tail |
Organism | Acromyrmex echinatior (Panamanian leafcutter ant) (Acromyrmex octospinosus echinatior) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota>
Neoptera> Endopterygota> Hymenoptera> Apocrita> Aculeata> Formicoidea>
Formicidae> Myrmicinae> Acromyrmex.
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Aromaticity | 0.07 |
Grand average of hydropathy | -0.044 |
Instability index | 46.57 |
Isoelectric point | 6.57 |
Molecular weight | 110207.74 |
Publications | PubMed=21719571
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP27106
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.95| 14| 83| 139| 173| 1
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159- 172 (23.90/17.50) ELVDKPASILQQML
784- 797 (24.05/18.75) ELVEPQSSILAKLC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 524.02| 181| 277| 233| 463| 2
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233- 447 (269.78/208.96) C.PEKTKMESITHCLQPLFAVQVllnpstettvfvNQLLmvQRLKS....YTNARLYCEIirACLMCLhnvtGTFKE..SQW..GAFTFLKVPHILKELH....................................VTNLNGDEkfeySQDIL.DAFELLLQFTPLL..DIMDTTCSCNYVECLLNEL...QKVNLVTEKQAKQIGARregatttSSIPkviVRAGQTLNGILRTLNADY..AKIQEGLLSVLYQVLTGKSFELMLAV
522- 755 (254.25/125.15) CmPERNKLKSPQRMLQSVDSARV............DALL..AQINSpdpdFKSSNLKWHV..ACQSAM....GAVKEllCAWesGVLGAGDVKRALDGLRatacclpvcaaawlcaymsithqdallkpmnmvqhfLTPLSGDE....MQDNLkDRSSLMVQIIRKMqyDVHPPTQSKTKVLSMSHSIisrQPILEQLESVWQNINQR.......GWIN...IQATQSLESLLNTGGSLWfvTNIVKEVLKYRYQEELDQAVDLAFAV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 93.02| 26| 700| 99| 124| 3
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99- 124 (45.56/31.08) CIVSLLEFLESIQVGITCRGKPEEDL
800- 825 (47.47/32.69) CIFSTLEYNNSNPYRGNSRKRVRRDL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.21| 17| 653| 211| 227| 4
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211- 227 (30.86/17.31) QKSVVPIEDSL.KKLCNL
866- 883 (25.35/13.05) QKSVVILRDPLmTALNNL
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