<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27071

Description Uncharacterized protein
SequenceMAMTQALVKRAVEDVKRVLRIREEKPPLQQMVREGIVGEDLLDKIVRAEQELEDELQQVIEDSEMYRPGWGKTIFQEVSNIAQKQIQELAKQEASARMEEEMEEKKYSEQFSSSNVRETEKSDSKTYKNRNSENKENATTSNLSEEIEEERIRIEQELLEQEELEKQMADNKGKSGKDKGKGQFPSKPTIEIPMQISLESTATTENPYLDEEELANADVSGQPIRNAQDLFLRNAAIVVAETISAASRSNAKVQSHANEDISGSSVPNSANTQPILEQVKDRIFYAREEVQLALDVTLRLIAARQRQPENPSAVENQLRISNIGRKPSAAPMSRIRDLQYLLSSKAMCLRDASNALSRRAQQLSELVEQEQRFYGQHALALRHHNWPLQPRLGDLVAAILYVDYGFRKAGSRFTGIAEADVLRVPKKTKTTAVDSNEGMMIVPVHQSAMLLDIKFGEVSCLDTASMGPSYIPYALQGTIEHSNDMFSMDLASSRLAVFETELFQQASNYYNALTKELSMENGIGRQARLTTHAFMLQLDRQNAIYASLSKIYQINLGKTADFSSRLLALRVRLALRSQHNFYGSESTGVFQSAISGFILGRLQDLLELELHNAIQPLKHRLYARVETMHATNTLKPLLHTPQRYSLPTWTVIVLDQSVGSVRLCSNGMFECFSRHSNMTYQHSTIGDVLIFIQVMLSNYVINMITKEACSIFGCGALLGFEKVGQSVTITYAEFSICISIAAHEGSNACFLLSVAKFSWSERLWLYDNHTNRSVRCSQKFMDDVQSILMKLYGVVQK
Length797
PositionHead
OrganismBatrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) (Frog chytrid fungus)
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Chytridiomycota> Chytridiomycota incertae sedis> Chytridiomycetes> Rhizophydiales> Rhizophydiales incertae sedis> Batrachochytrium.
Aromaticity0.07
Grand average of hydropathy-0.379
Instability index51.84
Isoelectric point5.93
Molecular weight89890.08
Publications









Function






Annotated function


GO - Cellular Component
Sec62/Sec63 complex	GO:0031207	IBA:GO_Central

GO - Biological Function
GO - Biological Process
posttranslational protein targeting to membrane, translocation	GO:0031204	IBA:GO_Central









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP27071
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     281.64|      92|     187|     482|     579|       1
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  482-  579 (141.48/115.70)	SNDMF.....SMDLASSRLAVFETELFQQA..SNY.YNALTKELSMENGIGrqARLtthAFMlQLDRQNAI.YASLSKIYQI..NLGKTADF..SSRLLALRVRLALRSQH
  665-  769 (140.16/95.92)	SNGMFecfsrHSNMTYQHSTIGDVLIFIQVmlSNYvINMITKEACSIFGCG..ALL...GFE.KVGQSVTItYAEFSICISIaaHEGSNACFllSVAKFSWSERLWLYDNH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      95.10|      27|      44|     200|     226|       2
---------------------------------------------------------------------------
  155-  178 (22.20/11.01)	.....EQELLEQEELEKqmADNKG.........KSGKD
  200-  226 (47.78/32.21)	STATTENPYLDEEELAN..ADVSG.........QPIRN
  244-  275 (25.12/13.44)	SAASRSNAKVQSH..AN..EDISGssvpnsantQPI..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.15|      28|      44|      48|      91|       3
---------------------------------------------------------------------------
   29-   56 (46.58/25.29)	QQ......MVREG....IVGE..DLLDK....IVRAE..QELEDEL
   57-  102 (22.57/44.17)	QQviedseMYRPGwgktIFQEvsNIAQKqiqeLAKQEasARMEEEM
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP27071 with Med17 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) QIQELAKQEASARMEEEMEEKKYSEQFSSSNVRETEKSDSKTYKNRNSENKENATTSNLSEEIEEERIRIEQELLEQEELEKQMADNKGKSGKDKGKGQFPSKPTIEIPMQISLESTATTENPYLDEEELANADVSGQP
85
223










Molecular Recognition Features






MoRF SequenceStartStop




NANANA