<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27059
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAGQTDSVTVPLENGIKSFSQPLALDKAPFSPTAAAHCHQATSSLSNGHDMTSIPEMSDEDRTKLLPEIPPNTFPFGELLSRTVQTTYTDLLDLAETLPSASNDERKKQLLNFCFAKRKLFTKLLVLLRASSKSKDIMTCQRVHAFIDHQDGAFSRTADDLFAIHSQMRVAKIANYDIQTAVDVLTTGTYQRLPKSLKAQLVSEEPLTADEVSRTKERLNDLIRMRLTCEEVVPAALRHNMKIENGYVLFKVPGEFSVTLTMSPGNSEQPWTLVDLQILAKSTSTGYGGSLPSLQPTQLQAFKDASQRHLADDKSSYWLIVRLYEFIHKFCLTYQLHILSSQASYLCQNRWMDHLQVEKQELVLKLNMWHNPSASNAVSYREYYQLRISAEYIPTVYPDRSFEPMSDSDGLQKVVLESLSQMIVNSGKNNGLKISLIGILGSTVRDIDIPDMIKLNTESLDIEELLLSITDYQSRIIICAMRDELLTNASDSSAGSLVHSAFTSEHVQMSMGIEAETGNSTSPTIKSMLPAASLLVMYRPESWVRLSVNPRTGIVIASLADASGLGSLVGANSSTCSPISENAPAGSTLSKESGNGLKRITTSIDRNLKIVEQQINANVRNTKQAILYLRRATTITQIETMALYLGLEVADFAHIGTDSPLKHLQTDKVRLTHLRFPGKDDNVLVIAAGTPNDIHHDNALHSQVSDTVIYSEDAEFYVWIMSLKPSEHRTKKPEFQIIPLSPADVPGVLDSTDSLIDVDTSFLTAKLRLSKTSQHQSFSQAWPRIDLPVLSKIQTASSNLFAFAKLTEQLDLNGLTYQILVKNIPGYIPKGQTHVGDIHIARLNPKVVLSVRELFSLYGHAAFKSTHSSNSSTMDPGSNMHIPNSNIYVYLEPAKSLSFSAKSQSPTAKIDAISTEHHTHRIVAKMRLPDRLLSLEAHSLKISEYIEYDGTSQTITFQYHSVNEYIECFITEFLRVISMIYLTLQLKRYTKALENMNVKMDFFNLLMVNVQLFPNTVMQIKWLPQHDSQTNESGFSVWHGEYAASFQHNDGSPDELMVIADLFTAILNKTKEIFPLIQLLHRVAPLVSLLEHIRQRRVAFGQTGVVLKILSLTHFRIVFPYFSQLCGIEFVYERPGSFMMFDASMLDYAAELGLGSLAKVGLGIFCDDSIVDNSIDTEHTLRPLPEYIDMPAVSVPGMDQMRPPRIGLLYTLGTRVAQELADSATATTDPPRSSRQVADTPTHSKHGSIVVLPHGILCTFSMIDTVMVGIEGYIDVMCASDLIFSYLKTQPVTHSIHEEQHCRILFATESSKAALTCHSNGRWGFVIAATERTHDNKAAVANIPDSKAWLDRLNHDVNAIPIPKRNSLQWLKTVVHIAMLPDIPLRELMSVTRVSNSLNNTKPLALEWILQSPPDAPPHIPAPGEMSFIFDRDLERMRLLYRFTDTTTQESVLIPIKYNFGSGVISIWHNEAGDAIYPDITPYHPLDPKMEGLMKTLTNTNLPSLPILERTFVQASIKHIPPTMGGPGKLFAVLKHLTSRNILELKSGVNVQ |
Length | 1552 |
Position | Tail |
Organism | Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) (Frog chytrid fungus) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Fungi incertae sedis> Chytridiomycota>
Chytridiomycota incertae sedis> Chytridiomycetes> Rhizophydiales>
Rhizophydiales incertae sedis> Batrachochytrium.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.133 |
Instability index | 42.11 |
Isoelectric point | 6.23 |
Molecular weight | 172977.13 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
|
GO - Biological Function | transcription coregulator activity GO:0003712 IBA:GO_Central
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP27059
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.21| 17| 19| 1349| 1366| 1
---------------------------------------------------------------------------
1349- 1366 (28.61/22.65) WLDRLNHdVNAIP.IPKRN
1370- 1387 (27.61/16.22) WLKTVVH.IAMLPdIPLRE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 61.08| 18| 22| 1247| 1265| 7
---------------------------------------------------------------------------
1247- 1265 (27.89/26.39) GSIVVLPHGILcTFSMIDT
1272- 1289 (33.19/24.13) GYIDVMCASDL.IFSYLKT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 62.11| 18| 22| 773| 790| 8
---------------------------------------------------------------------------
773- 790 (33.16/21.38) SQHQSFSQAWPRIDLPVL
798- 815 (28.95/17.71) SNLFAFAKLTEQLDLNGL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.56| 16| 20| 1090| 1105| 11
---------------------------------------------------------------------------
1090- 1105 (28.40/17.56) LEHIRQRRVAFGQ.TGV
1112- 1128 (27.15/16.48) LTHFRIVFPYFSQlCGI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 38.61| 11| 29| 307| 317| 13
---------------------------------------------------------------------------
307- 317 (19.70/13.20) QRHLADDKSSY
335- 345 (18.91/12.33) QLHILSSQASY
---------------------------------------------------------------------------
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