<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP27051

Description Protein kinase family protein
SequenceMTMMASPYSSDDIHSPVNSTVVAIDKEKHSSYAVRWAVDHLLNMIHNPVMILVHVRTKNSNHGANLNNDDLNQLFIPYRGYCARKGVVLDDSDVAKTILDYVNNNLVNNLVLGASTKNTFARSFMFSKPHEVQSSIMKSTPDFCSVYVISKGGKVQSSRPAQRPITNTLAPPRVPSSGFLIQSLSDSEQDLIPRVQRSARNKPNETTYPHNRAAFNTTQKGYKSPINGSMDFNNGFNQAAFQRNPTLQSSFSDESDGGFGVMGSVDLSSQNSMDFYHGASSSSEESIPQSTKDIEAEMRRLKLELKQTMDMYSSACKEALTAKRKANELNQWKIEEARKFEKARLSEEAALAVAEIEKAKCRTAVEAAEKAQRMAELEGQRRKQAEMKAVSEEKDKDRAVSALAHNDVRYRKYSIEEIEEATERFANHRKIGEGGYGPVYNGELDHTPVAIKVLRPDAAQGKKQFQQEVEVLCSIRHPHMVLLLGACPEYGCLVYEFMENGSLEDRLFRTGNSPPLSWRKRFEIAAEIATALSFLHQAKPEPLVHRDLKPANILLDKNYVSKISDVGLARLVPASIADSVTQFHMTSAAGTFCYIDPEYQQTGMLTTKSDVYSLGILLLQIITGRPPMGLAHQVSRAISKGTFKEMLDPVVPDWPVQEAQSFATLALKCAELRKRDRPDLGKEVVPHLIRLKNFGNDGDERTNEWI
Length706
PositionTail
OrganismArabidopsis thaliana (Mouse-ear cress)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Camelineae> Arabidopsis.
Aromaticity0.07
Grand average of hydropathy-0.487
Instability index42.23
Isoelectric point7.63
Molecular weight78851.48
Publications
PubMed=11130714
PubMed=27862469

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP27051
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     103.50|      36|      48|     316|     362|       1
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  318-  362 (45.31/63.29)	EALTAKRKANELNQwkieearkFEKARLSEEAALAVAEiEKAKCR
  363-  398 (58.19/40.44)	TAVEAAEKAQRMAE........LEGQRRKQAEMKAVSE.EKDKDR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.00|      16|      21|     120|     135|       2
---------------------------------------------------------------------------
  120-  135 (30.66/17.44)	FARSFMFSKPHEVQSS
  143-  158 (28.48/15.74)	FCSVYVISKGGKVQSS
  169-  177 (16.85/ 6.64)	LA.......PPRVPSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     134.82|      30|      49|     625|     654|       3
---------------------------------------------------------------------------
  573-  602 (33.46/22.37)	..PASIADSVTQfhmTSAAGTF.CYIDPEYQQT
  625-  654 (53.56/40.69)	RPPMGLAHQVSR...AISKGTFKEMLDPVVPDW
  677-  705 (47.80/35.44)	RPDLG.KEVVPH...LIRLKNFGNDGDERTNEW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.84|      23|      41|     224|     249|       4
---------------------------------------------------------------------------
  224-  249 (34.38/32.94)	SPINgSMDFNNGFNQAAFQRNPtlQS
  268-  290 (41.47/26.56)	SSQN.SMDFYHGASSSSEESIP..QS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.14|      17|      21|      62|      78|       7
---------------------------------------------------------------------------
   62-   78 (31.20/23.12)	HGANLNNDDLNQLFIPY
   85-  101 (25.94/17.98)	KGVVLDDSDVAKTILDY
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP27051 with Med32 domain of Kingdom Viridiplantae
Unable to open file!