<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26999

Description Predicted protein
SequenceMMQGSPLSPEEHRLTSPPSLHQPASTIVVAIDRDRNSQLAMKWVVDHLLSGASHIILLHVAAHHPAANHGFAMAETTQDALEAEMKEIFVPFRGFCSRNGVLESEVILEEADISKAIIDYISANKIQSIALGASNRNAFTKKWKNPDVPSSLMKGAPDYCNIYVVAKGKPVNVRLAKCGVPADDSDFVLATYSRRSSRSQLPPVMPESMISCSRRSIDRPELTTRPPFRERPLAASATTKPLLLSGRMDSTDGSYRSTLRTNSHDPSNLDPDFAQAIHFSSMDFGENLDALSLSPRESGSPLSAAQREVEAEMRRLKLELKQTMDMYNAACKEAISAKQRAKEMHLLKMEEARRLEEARQAEEAALALAEMEKVKCRAAMEAAEAAQRLADLEAQRRRNAEVRARREADEKVRALDAIANHDFRYRKYNIDEIEIATERFSESLKIGEGGYGPVYSASLDHTPVAIKVLRPDAQQGRKQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLFRRGGTPTLPWSQRFRISAEIATALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPAVADSVTQYRLTATAGTFCYIDPEYQQTGKLGVKSDIYSLGVLLLQVITARPPMGLTHHVEKAIESGTFAQMLDVTIKDWPVEDALGFAKLSLKCTEMRRRDRPDLGTVVLPELNRLRNLGIAYDQARATVPVSDSSSHGQERVSSPTVDAGSWRTAES
Length748
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.06
Grand average of hydropathy-0.370
Instability index51.58
Isoelectric point6.70
Molecular weight83094.75
Publications
PubMed=21415278
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP26999
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      75.57|      22|      22|     358|     379|       1
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  342-  367 (21.06/ 8.92)	.KEMHLLKMEEArrleeAR.QAEEAALA
  368-  388 (27.85/13.93)	LAEMEKVKCRAA.......mEAAEAAQR
  389-  414 (26.67/13.06)	LADLEAQRRRNA.evraRR.EADEKVRA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.28|      20|      22|     146|     166|       3
---------------------------------------------------------------------------
  146-  166 (33.88/33.54)	PdVPSSLMK.GAPDYCNIYVVA
  170-  190 (30.40/23.15)	P.VNVRLAKcGVPADDSDFVLA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.52|      18|      39|       7|      24|       4
---------------------------------------------------------------------------
    7-   24 (33.20/21.84)	LSPEEHRLTSPPSLHQPA
   49-   66 (31.32/20.18)	LSGASHIILLHVAAHHPA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     143.18|      46|     373|     266|     315|       5
---------------------------------------------------------------------------
  266-  315 (70.24/51.12)	PSNLDPDFAQAIHfsSMDFGENLD.ALSLSPRESGspLSAAQREVE.AEMRR
  642-  689 (72.94/41.17)	PMGLTHHVEKAIE..SGTFAQMLDvTIKDWPVEDA..LGFAKLSLKcTEMRR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP26999 with Med32 domain of Kingdom Viridiplantae
Unable to open file!