<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26949
Description |
Uncharacterized protein |
Sequence | MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQQAFREKLAQQQQASAAAAAAAAAAATAAPAAPAAVAQQHPPKNGEAAVNGEENGAHAINNHSKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK |
Length | 526 |
Position | Tail |
Organism | Canis lupus familiaris (Dog) (Canis familiaris) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Laurasiatheria> Carnivora> Caniformia> Canidae> Canis.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.268 |
Instability index | 38.94 |
Isoelectric point | 5.46 |
Molecular weight | 56728.64 |
Publications | PubMed=16341006
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Function
Annotated function |
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GO - Cellular Component | histone deacetylase complex GO:0000118 IBA:GO_Central
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GO - Biological Function | transcription corepressor activity GO:0003714 IBA:GO_Central
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GO - Biological Process | histone deacetylation GO:0016575 IBA:GO_Central
regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
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Interaction
Repeat regions
Repeats |
>MDP26949
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
8| 371.23| 40| 40| 334| 373| 1
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177- 206 (34.18/17.35) ..............LRGHESE...........VFICAWNPVS.........dlL.ASGS.GDSTAR
225- 262 (42.91/23.73) HCirEGGHDVP..S....NKD...........VTSLDWNSDG.........tlL.ATGS.YDGFAR
263- 292 (31.31/15.25) I...WTEDGNLASTLGQHKGP...........IFALKWNKKG..........nY............
293- 344 (44.81/25.12) IL..SAGVDKTTIIWDAHTGEakqqfpfhsapALDVDWQNNT..........tF.ASCS.TDMCIH
345- 386 (62.80/38.28) VC..RLGCDRPVKTFQGHTNE...........VNAIKWDPSG.........mlL.ASCS.DDMTLK
387- 437 (58.69/35.27) IW..SMKQDTCVHDLQAHSKE...........IYTIKWSPTGpatsnpnsnimL.ASAS.FDSTVR
441- 479 (50.47/29.26) VE..RGVC...IHTLTKHQEP...........VYSVAFSPDG..........kYlASGS.FDKCVH
480- 521 (46.07/26.04) IW..NTQSGSLVHSYRG.TGG...........IFEVCWNARG........dkvG.ASASdGSVCV.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 72.70| 22| 27| 94| 115| 2
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94- 115 (34.93/23.85) TRQQAFREKLAQQQQASAAAAA
122- 143 (37.77/26.41) TAAPAAPAAVAQQHPPKNGEAA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.55| 24| 28| 30| 54| 3
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30- 54 (35.75/25.32) IESHISqSNINGTLVP..PAALISILQ
60- 85 (34.80/19.94) VEAEIS.INEDGTVFDgrPIESLSLID
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