<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26926
Description |
Mediator of RNA polymerase II transcription subunit 8 |
Sequence | MQREEKQLELTLEALISQVADLKNSLVSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLNKVLKHEKTPLLRNQVIIPLVLSPDRDEEIMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEKQLITDAARISPDGAQKQIQSLNKMCSNLLEKISKEERESESGGLRQNKQTFNPTDTNALVAAVAFGKGLSNRRPPGSGGSVQSGQPGAGAIIAGASGMQQVPMSSAPAQQQPMLAGVQMAQAGQPGKMPSGIKTNIKSASMHPYQR |
Length | 268 |
Position | Head |
Organism | Gallus gallus (Chicken) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Archelosauria> Archosauria> Dinosauria> Saurischia> Theropoda>
Coelurosauria> Aves> Neognathae> Galloanserae> Galliformes> Phasianidae>
Phasianinae> Gallus.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.524 |
Instability index | 52.85 |
Isoelectric point | 6.93 |
Molecular weight | 29314.03 |
Publications | PubMed=15592404
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364144
|
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
|
GO - Biological Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000978 IBA:GO_Central
transcription coregulator activity GO:0003712 IBA:GO_Central
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP26926
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 80.42| 26| 28| 122| 149| 1
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122- 149 (40.27/30.58) KqlITDAARISPDGAQKQ.IQSLNKMCSN
153- 179 (40.16/24.26) K..ISKEERESESGGLRQnKQTFNPTDTN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 88.27| 25| 36| 185| 209| 3
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185- 209 (46.03/24.91) VAFGKGLSNRRPPGSGGSV.QSGQPG
223- 248 (42.24/22.29) VPMSSAPAQQQPMLAGVQMaQAGQPG
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|