<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26886

Description Uncharacterized protein
SequenceMHQHQQQQQHQGDAAADEVRDEMVKIAMSSTGSIDGATMDRLFGTIAMIKKEKWRHLGSGNGSTTNTTSNATDHLRLSASLFARLRRLNQTHFDTIMVKWLKRLRMLRDRPAVAIIYPVFVVFGCLDLASLLATTADEQPREPGGPVQSPARNTWRTSYLQDVLALLTAPKADRGSGSSCNATLTCDENQRFRLFLSEAPFAAPAAIAALVRNAVAEMTQWRRQQNMTTAAGHHAAPRSSVDALAVSRLLRTAAVADATAAAHALAQTTDQAVRRGLWEMTTLALTRQVVPARPALDMLRELDIFAADMGQLALGLAADGLAGLILRAVAESQLPSLHVLHSLPSDMAVSLKEHAQARFLDLVPTRKQPLRDAQHVCVATGFLDVVRTIMLSQQLQQKRQKQRPRSQPPAPPPLLLSPAIQSAAGLPALDSAVVDKLGELWCLLQEHKTSTAAAMATRQSIIQDWLPALLSLVLLHLPSRGLTTADGLGPSLPRTSRDLDQETVSAGACIVLASLCIDIVPLADDPADGNSSGRLALQTRLFDTALLLADGLSDETRQSCVRTLRDVSASVAVPNTVGAGDLSPAMAYLLSSPASASIYYPRLYLERMPAMFGRPGPQQQQQSGTSSQPTTGAVRRLAGFAAPPERSRRVRFGLKTWDAVSDPSPAVQDNDTAVNLWLLEATKVVRQRRR
Length690
PositionKinase
OrganismGrosmannia clavigera (strain kw1407 / UAMH 11150) (Blue stain fungus) (Graphiocladiella clavigera)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Sordariomycetidae> Ophiostomatales> Ophiostomataceae> Grosmannia.
Aromaticity0.04
Grand average of hydropathy-0.128
Instability index56.02
Isoelectric point9.39
Molecular weight74664.64
Publications
PubMed=21262841

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP26886
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.75|      33|      37|     212|     248|       1
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  212-  244 (60.52/32.53)	RN.AVAEMTQ.............WRRQQNMTT.AAGHHAAP.RSSVDAL
  251-  299 (36.23/11.40)	RTaAVADATAaahalaqttdqavRRGLWEMTTlALTRQVVPaRPALDML
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      69.49|      17|      31|     128|     144|       2
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  128-  144 (28.30/17.97)	LASLLA.TTADEQPREPG
  160-  177 (22.71/12.85)	LQDVLAlLTAPKADRGSG
  178-  191 (18.48/ 8.96)	SSCNAT.LTCDENQR...
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     392.09|     120|     392|       1|     127|       3
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    1-  127 (187.19/147.58)	MHQHQQQQ..QHQGDAAADEVRDEMVKiamSSTG..SIDGATMDRLfGTIAMIKKEkwrHLGSGNGSTTNTTSNATDHLR..LSASLFARLRRLNQTHF.DTIMVKWLKRLRMLRDRPAVA....IIYPVFVVFGCLD
  343-  390 (37.84/16.63)	..................................................................................LPSDMAVSLKEHAQARFlDLVPT....RKQPLRDAQHVC....VATGFLDVVRTIM
  395-  518 (167.05/111.65)	LQQKRQKQrpRSQPPAPPPLLLSPAIQ...SAAGlpALDSAVVDKL.GELWCLLQE...HKTSTAAAMATRQSIIQDWLPalLSLVLL.HLPSRGLTTA.DGLGPSLPRTSRDL.DQETVSagacIVLASL....CID
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP26886 with Med12 domain of Kingdom Fungi
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