<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26768
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPLILDNSMQVDLDNVDDLFGDDVPLSIPVRSQGKQLQQRLDELRNRGACQAVAWSKSGTIASLTPDGLTLELRFLRCHPDTGAWELSEPTTCDLVKGTPAIPLVHLEWGTTNTPDLAIIDAAGRVALYMLKIVLSKTSDSSKKPFNIMYGPANKNGNGYQYESSFVHAIGPNHPHSAKSALFCVSSGGMLKMYWSQNNGRMEETTMELESINTSDELVTHAAFASDKKHLLAAVATSSRQLRLLKIEIQWAGPGSSSEKTTMPQNARLNPALVETHVASASWLCAGPNETNYDASMAELSFLHVLPAVMDNTGSSTVPPLIMTVRSRDVGDGSFQSAQSVLDRWEAIESKQSLDSAFEQLGNRRNSVSSDLPSTIKLKKLEPIVINKVVIGIQDIQYRKVLILTMSDGSIEYRDRFTFEEMYVNEDLTKVMTLRQVGWGFSDDGPCHQVAFSPTCCSMIQIGDDGKVRWNKLEYPSSDIGNSPQDPVVQPLAIRKRFLPDWISEIIRILKIQVDYSEETHHDSLMRNSPLQSCLSIMSSLGFQGETRRRSFQSKFAIISLNMRNVVILITLASNTPMNIREKMSPLDEHEVVEALAGCAKWSVDLLCWLVDCLFELMNDDNFIQRLNPQRFGELNQYLHDRNDVSLHLLLSSSSRSFVSAVCRRISLLENISNKAIDFYKRQASGDQQGGAKPPNPQLQQAYQKMQQVTSTSLIKVTEFEKLLNILASDIRQTYAAYIPGIAKNRSNPPQGKQLDIAIKNTQAHFEMAMLLSGSLGSYFLPVLSKFFAKDLPAFRKLTDPAKLFFADFELLEVQDDRSSLAARKAKGVHVDIFKRTELRGGRGTSRWRRCTRCTAVMEDVFGSRPGFTFVLAQQRKCSCSGYWALLPKGKLVL |
Length | 894 |
Position | Tail |
Organism | Metarhizium acridum (strain CQMa 102) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Clavicipitaceae> Metarhizium.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.247 |
Instability index | 49.52 |
Isoelectric point | 7.52 |
Molecular weight | 99729.95 |
Publications | PubMed=21253567
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP26768
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 102.62| 31| 53| 195| 226| 1
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195- 226 (51.17/44.13) WSQNNGRMEETTMElESINTSDELV.THAAFAS
251- 282 (51.45/38.95) WAGPGSSSEKTTMP.QNARLNPALVeTHVASAS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 115.39| 37| 648| 116| 153| 3
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116- 153 (59.14/37.00) DLAIIDA..........AGRVALYMLKiVLSKTSDSSKKPFNIMYGPA
756- 802 (56.25/31.09) DIAIKNTqahfemamllSGSLGSYFLP.VLSKFFAKDLPAFRKLTDPA
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