<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26634
Description |
Uncharacterized protein (Fragment) |
Sequence | MTSRPGPGIHESLQNRASGVPPRTQAQRRASKPAHTLLHPDCIDPALDDERPAAHHAAAAAHDAARPPPRGRPPLFYTTIAQHPLDIHPHGLPYQPPANLPVPPRPGLVHLRDAAHQRRILPGGTGVKDAPKSGAPEVIVPPVYFPGGKPADLFPWSGNNAEDNLTETLVKAGVSNKPQIMNESNTARPSLINNLKNKSGLSTLSTLFVAVLEKRQQTGRLQTPNTFKPPPRLTLRDSTREQWLHDLANPNTGLRRLSRTIPHGLTGKVLLEQCLNKNIPLPRALWLAKCVGINELRAHKRKGQAGTVTWGRGWTSSVEQFIDGVIATIGQGDWKPRITYALQLATHLYKEHLLDDDHFLDWIVDGLGSCPSERLFIWLLIVSISHYWADVSCCRRRGKRLAESLLNQLDKIYRVEDVNPYLAVLHYLENTVIRLIATRPACLLLPTTWAKYSPLLVQLAERRNHPNVTQAVRRLEQRNSRLLQCSKSLPSASQTPAGRVYRILDSVDYSRPVRIEDLSFDCMEVVADAPRLIDILLRWACSCYREGSHRIYLATRLLRKWAHLGADVYDGILSHFHDMTWVATGESTTLFKIVAELVRSKTFATGRYLQWLIATG |
Length | 616 |
Position | Kinase |
Organism | Pyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes>
Pleosporomycetidae> Pleosporales> Pleosporineae> Pleosporaceae>
Pyrenophora.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.335 |
Instability index | 45.86 |
Isoelectric point | 9.67 |
Molecular weight | 68901.34 |
Publications | PubMed=21067574
|
Function
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
Component of the srb8-11 complex. The srb8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The srb8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 ARBA:ARBA00002895
ECO:0000256 ARBA:ARBA00003744
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP26634
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 111.61| 31| 46| 4| 43| 1
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4- 34 (55.47/18.77) RPGPGIHESLQNRASGVPPRTQAQRRASKPA
51- 81 (56.14/29.52) RPAAHHAAAAAHDAARPPPRGRPPLFYTTIA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 86.90| 24| 52| 310| 334| 3
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310- 334 (43.23/36.10) W...GRGWTSSVEQFIDGVIATIGQgDW
362- 388 (43.67/30.68) WivdGLGSCPSERLFIWLLIVSISH.YW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 161.08| 43| 50| 188| 235| 4
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89- 108 (24.46/ 8.20) ......................PHGL.......PY...QPP.ANLPvPPR.PGL
188- 235 (68.76/45.06) RPSLINNLKN.KSGLSTLSTLFVAVLekrqqTGRL...QTPNTFKP.PPR.LTL
240- 287 (67.87/35.31) REQWLHDLANpNTGLRRLSRTIPHGL.....TGKVlleQCLNKNIP.LPRaLWL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.62| 14| 23| 121| 134| 5
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121- 134 (26.74/14.04) LPGGTGVKDAPKSG
145- 158 (27.88/14.93) FPGGKPADLFPWSG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 58.61| 17| 149| 392| 408| 6
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392- 408 (31.86/20.36) SCCRRRGKR..LAESLLNQ
542- 560 (26.74/15.91) SCYREGSHRiyLATRLLRK
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