<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26579
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MTTILEGKNNKDEHAHNHKQNVNNEPYYHQSKNQKHQNNHQQQQAFISTSPASSSSSSSNHQLTKKFKSECSAQRHIQFDQETLNQIDRVELQRLWGPHLVPLQFVIQRTIAQVFNELQILSQISPNLEDYDRKKRVIDFVVHSRRQLIKLLVLVKWSSNSVPVHKIMSIVAFLQRQNSQFERNVNILKASKESFHSARMRNYDLATALQVLTNGYPTLPGRLIDQFDSKPKLSDSEVIKIMHDLNELIRYRLASCEVIPKEFRSYRIYDGRVVFKISRMFECSLTLGGGELDSQWYLLHVEFLFRVTGPRGKDFMSIPQGPVKSQIIECGNRTMAPNTLPTEADPDPKPPERPIMKLFAYLRDLCLNYQLEALHYQASQLGRSAWATHTRLLISPDRSNLTIVYWLHARPVSIPVTRPGQQPPRNPPQPTPQGTLTVRRHIERHSPSRTRVLDFLNGYPLKDKLPSDGQDGDFGASHTERLQVVWRPSEVTSRGGPVTREVLGGLKIREGDEVDFLKTDSGQLELELKILYFETGLFRLDTTRPTSGRFFNTRRTVLCLSTADTMEDTSSSERFAKSIEVVLHARHAIEVLIDQFSGRFRLQSITNPIRLDEGDNDSHIAGSWLVLVVIIRQAKQSAINHANPSGLRDVLVRLNSDILLDQIEFKARLLGIQTTRNLPIQLQLLSMPSYLSSPSTIPQHIFQLTLYCRLSNFPHHYLLIMVTENGIRCALIIVNQKRDDQPSNHGGSSMSWNVNSVSAVEVPTFSDDLDEDGGVLDQFTLSRTQLQYVYHYCLVQVTLSQLKAPLRQNQISYEQQLPVTTEIIKKTYQEHRNQRPKLTGKPPPSSIKLPEFHQAHEVTGLLLIPLQGFLKPSFFHSHHLLTQKDIFDGQKLALKVLLQPESHFGVQLELRFKFNPDKLKAEELEKIIKSKETNLNSKIVSNYLMRQAKSQSPVTPNPRNFGQPPKDDDDDDDDEDEEPLSRRIQPTRPKPASPAVTNTAEEPRKECPNLEEDPDAEFVDSDSWSIDAQSNQFIMRFQNFNQQIDQIYPLSIQKFINLIHSDADPLP |
Length | 1067 |
Position | Tail |
Organism | Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) (Black stem rust fungus) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Pucciniomycotina>
Pucciniomycetes> Pucciniales> Pucciniaceae> Puccinia.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.534 |
Instability index | 50.48 |
Isoelectric point | 8.14 |
Molecular weight | 122137.18 |
Publications | PubMed=21536894
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Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
|
GO - Biological Function | transcription coregulator activity GO:0003712 IBA:GO_Central
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP26579
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 113.35| 35| 47| 438| 484| 1
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438- 475 (55.95/59.68) VRRHIE...RHSPSrTRvlDFLNGYPLKDKLPSDGQDGDFG
485- 522 (57.40/31.30) VWRPSEvtsRGGPV.TR..EVLGGLKIREGDEVDFLKTDSG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 160.92| 61| 312| 565| 644| 3
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577- 644 (91.67/106.69) KSIEVVLhARHAIEVLIDQFSGRFRLQSITN....PIRLDEGDNDSHIAGSWLvlvviIRQAK.QSAINhANP
645- 683 (36.73/12.20) SGLRDVL.VRLNSDILLDQIEFKARLLGIQTtrnlPIQLQ.................................
928- 958 (32.51/13.66) ....................................IKSKETNLNSKIVSNYL.....MRQAKsQSPVT.PNP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 389.28| 130| 684| 104| 241| 5
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104- 241 (210.21/149.45) QFVIQRTIAQ.VFNE..LQI.LSQI.SP...NLEDYDRKKRVIDFVVHS.....RRQLIKLLVLVKWSSNSVP.VHKIMSIVAFLQRQNSQFernvniLKASkeSFHSARMRN....YDLAT.ALQVLTNGYPTLPGRLIDQFDSKP.KLSDSEVIKI
778- 927 (179.07/111.90) QFTLSRTQLQyVYHYclVQVtLSQLkAPlrqNQISYEQQLPVTTEIIKKtyqehRNQRPKLTGKPPPSSIKLPeFHQAHEVTGLLLIPLQGF......LKPS..FFHSHHLLTqkdiFDGQKlALKVLLQPESHFGVQLELRFKFNPdKLKAEELEKI
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