<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26539

Description Uncharacterized protein
SequenceMSGLAYYQPEHPGSAGVVKYPENGHDTLSDFVTFVCQEAENTQQLPQTQLTGSRTGIQKFSQYYPSSMLPPPPPAPMARPVAIIRSTGELTASTASSPPTSSTSPTDPAELGSNQEQMTAAAAVGLVSSACQNSVEPTGRKSPTRILVTPHTSREYTFAHFHSQPGQQIFTYPTIGSMSGVISPTNLSLFSSPVSVTRPVTAQRPVSNVPPRWNTAPFINLEDDYNMIGPIIAGTTSEPSATMEEERYYHPVHTSGVDKNGNGNLIGNELGVNTDPTSHHHQQHQQQQQHQQQQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQQQQPQSQQQQQPSSQQQQQQVMPDKSGGPKSPP
Length356
PositionKinase
OrganismHarpegnathos saltator (Jerdon's jumping ant)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Hymenoptera> Apocrita> Aculeata> Formicoidea> Formicidae> Ponerinae> Ponerini> Harpegnathos.
Aromaticity0.05
Grand average of hydropathy-0.989
Instability index76.46
Isoelectric point5.97
Molecular weight39142.29
Publications
PubMed=20798317

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP26539
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     114.80|      18|      18|     285|     302|       1
---------------------------------------------------------------------------
  279-  297 (37.05/ 8.40)	HHHQQhQQQQQHQQQQQQQ
  298-  316 (37.47/ 8.57)	QQQQQqQQQQQHQQQQQQQ
  317-  334 (40.28/ 9.66)	QQQQQ.QQQQQPQSQQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.23|      27|      33|      65|      97|       2
---------------------------------------------------------------------------
   65-   97 (43.48/28.60)	PSSMLPPPPPAPMArpvaiiRSTGELTASTA....SS
   99-  129 (40.76/17.12)	PTSSTSPTDPAELG......SNQEQMTAAAAvglvSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      74.57|      14|      35|     226|     239|       3
---------------------------------------------------------------------------
  182-  193 (13.63/ 6.60)	..ISPTNLSLFSSP
  195-  205 (16.23/ 9.48)	SVTRPV...TAQRP
  226-  239 (24.70/18.83)	NMIGPIIAGTTSEP
  264-  276 (20.01/13.65)	NLIGNEL.GVNTDP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP26539 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) FSQYYPSSMLPPPPPAPMARPVAIIRSTGELTASTASSPPTSSTSPTDPAELGSNQEQMT
2) SPVSVTRPVTAQRPVSNVPPRWNTAPFINLEDDYNMIGPIIAGTTSEPSATMEEERYYHPVHTSGVDKNGNGNLIGNELGVNTDPTSHHHQQHQQQQQHQQQQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQQQQPQSQQQQQPSSQQQQQQVMPDKSGGPKSPP
60
192
119
356










Molecular Recognition Features






MoRF SequenceStartStop




1) IQKFSQYY
2) MSGLAYYQP
3) QQQQHQQQQQQQQQQQQQQQQQPQSQQQQQPSSQQQQQQ
57
1
305
64
9
343