<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26473

Description Heat shock protein 70
SequenceMSGPAIGIDLGTTYSCVGLWQHDRVEIIPNEQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRKFSDPTIQHDVSHWPFKVVAGPGDKPMIQVAYKGEEKTFAPEEISSMVLVKMKEIAQAYVGADKEVKKAVVTVPAYFNDSQRQATKDAGVIAGLEVMRIINEPTAAAIAYGLDKKGTTSGEQNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNFFVQASFKRKHRKDISSNPRALRRLRTSCERAKRTLSSSTQASIEIDSLYEGIDFYSSITRARFEELNMDLFRKCMEPVEKVLRDAKMDKGQVNEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILNGETHEKVQDLLLLDVIPLSLGLETAGGVMTVLIARNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERSRTKDNNLLGKFELTGIPPAPRGVPQINVTFDVDANGILNVSAEDKTTGNKNKITITNDKGRLSKDEIERMVQEAEKYKAEDETHRTRVEARNGLENAAYGLRNTVRDTNLADKLSAEDKEAIEKAVDKVVDWLDHNQLAEEEEITHQREEMEAVCNPIITKLYQGAPPPPEAGGASAGGAASGPGPKIEEVD
Length645
PositionUnknown
OrganismChlorella variabilis (Green alga)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Chlorophyta> core chlorophytes> Trebouxiophyceae> Chlorellales> Chlorellaceae> Chlorella clade> Chlorella.
Aromaticity0.06
Grand average of hydropathy-0.410
Instability index31.85
Isoelectric point5.20
Molecular weight70742.06
Publications
PubMed=20852019

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP26473
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      77.22|      18|      21|      34|      51|       1
---------------------------------------------------------------------------
   12-   29 (20.18/10.61)	....TTYSCVGLWQHDRveIIP
   34-   51 (32.70/21.46)	NR..TTPSYVAFTDTER..LIG
   56-   74 (24.33/14.21)	NQvaMNPINTVF.DAKR..LIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     200.62|      70|      75|     447|     520|       2
---------------------------------------------------------------------------
  447-  520 (103.31/72.11)	VYEGERSRTKDNNLLGKFEL.TGIPPAPRGVpQiNVTFDVDANGILnvSAEDKTTGNK..NKITITNDKGRLS.KDEI
  524-  597 (97.31/54.90)	VQEAEKYKAEDETHRTRVEArNGLENAAYGL.R.NTVRDTNLADKL..SAEDKEAIEKavDKVVDWLDHNQLAeEEEI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.23|      17|      19|     247|     264|       3
---------------------------------------------------------------------------
  247-  264 (25.61/17.37)	QASFKRKHRkDISSNPRA
  269-  285 (28.61/15.22)	RTSCERAKR.TLSSSTQA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     162.36|      40|      41|     315|     355|       4
---------------------------------------------------------------------------
  315-  355 (61.99/52.33)	FrKCMEPVEKVLRDAKMDKGQVNEVVLVGGSTRIP.KVQQLL
  359-  397 (58.87/44.00)	F.NGKELCKSINPDEAVAYGAAVQAAILNGETH.E.KVQDLL
  399-  433 (41.50/28.24)	..LDVIPLSLGLETA....GGV.MTVLIARNTTIPtKKEQVF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.75|      10|      26|     204|     213|       5
---------------------------------------------------------------------------
  204-  213 (19.09/12.01)	LGGGTFDVSL
  232-  241 (19.67/12.61)	LGGEDFDNRL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP26473 with Med37 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KTTGNKNKITITNDKGRLSKDEIERMVQEAEKYKAEDETHRTRVEARNGLENAAYGLR
2) VDWLDHNQLAEEEEITHQREEMEAVCNPIITKLYQGAPPPPEAGGASAGGAASGPGPKIEEVD
498
583
555
645










Molecular Recognition Features






MoRF SequenceStartStop




1) IITKLYQG
2) KIEEVD
611
640
618
645