<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26389
Description |
ATP-dependent DNA helicase (Fragment) |
Sequence | EVNYVEGANDRQWSRSDFPWSMDLKANNRRYFGNKSFRPNQHEIINATMSGHDVFVLMPTGGGKSLTYQLPAICCPGVTLVVCPLVSLIMDQIMHLSQASIRAEHLSSNLEYEEQRQILQQLNFDHCEYRLLYVTPEKIARSDNLLRNLENLHRRRLLARIVIDEAHCVSQWGHDFRPDYQNLGILKQKFSDVPLMALTATATMRVKEDVVQALGLCKCIIFRQTFNRPNLRYSVVPKTKKVYEEIDAFIKENYPRESGIIYCFSKMDCERVCEQLRKTGHKIGFYHASMDPQERNRVQRMWSKDEINIICATVAFGMGINKPDVRFVIHHSIPKSIEGYHQESGRAGRDNLPASCILYYSYSDYVRVKHLLSQGAVDQTSTGRSWNNSDTANQMKTNFDNLQRMGAYCENEVDCRRSLQLGHFGEKFDSASCKSTCDNCSKAVSFVEEDMTPVCQQLVQLINGLGQSFTMSHVIDVFRGSMSQQVKNANHHLQELHGAGKSLNKSVVERILHRLVFDEVLKENINKSDTFGSISSILKVNDYKARELFDGVCKIMMKFPAAKKADKPERTPVSTKKAPLATKLSDPEDGLSSSSSVSPAISMEVYSALQKLRTEIMNEIGGNLLPYHIMGNGELHQISKRLPKTVDELLEINGIGKVKSNKYGARILEVVDQVVREHSSSDKTRNKVSAASMPKRQRDAPDS |
Length | 703 |
Position | Unknown |
Organism | Selaginella moellendorffii (Spikemoss) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Lycopodiopsida> Selaginellales> Selaginellaceae> Selaginella.
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Aromaticity | 0.07 |
Grand average of hydropathy | -0.458 |
Instability index | 45.30 |
Isoelectric point | 8.73 |
Molecular weight | 79720.17 |
Publications | PubMed=21551031
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Function
Annotated function |
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GO - Cellular Component | chromosome GO:0005694 IBA:GO_Central
cytoplasm GO:0005737 IBA:GO_Central
nucleus GO:0005634 IBA:GO_Central
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GO - Biological Function | 3'-5' DNA helicase activity GO:0043138 IBA:GO_Central
ATP binding GO:0005524 IEA:UniProtKB-KW
four-way junction helicase activity GO:0009378 IBA:GO_Central
nucleic acid binding GO:0003676 IEA:InterPro
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GO - Biological Process | DNA duplex unwinding GO:0032508 IBA:GO_Central
DNA recombination GO:0006310 IBA:GO_Central
DNA repair GO:0006281 IBA:GO_Central
DNA unwinding involved in DNA replication GO:0006268 IBA:GO_Central
double-strand break repair via homologous recombination GO:0000724 IBA:GO_Central
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Interaction
Repeat regions
Repeats |
>MDP26389
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 379.66| 120| 143| 205| 333| 2
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205- 333 (194.84/141.40) RVKEDVVQAlglcKCIIF..RQTFNRPN..LRYSVVPKTK..KVYEEIDAF..IKENYPRESGI.IYCFSKMDCERvCEQLRKTGHKigFYHASMDPQERNRVQRM.WSKDEINIICATVAfgMGINKPDVRFVIHHSI
346- 475 (184.83/110.80) RAGRDNLPA....SCILYysYSDYVRVKhlLSQGAVDQTStgRSWNNSDTAnqMKTNFDNLQRMgAYCENEVDCRR.SLQLGHFGEK..FDSASCKSTCDNCSKAVsFVEEDMTPVCQQLV..QLINGLGQSFTMSHVI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 235.38| 77| 128| 493| 574| 3
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493- 574 (112.96/114.06) LQELHGAGKSLNKSVVERiLHRLVfDEVLKEN.IN..KSDTFGsiSSILKVNDYKARElFDGVCKIMMKFPAAKKADKPERTPVS
624- 703 (122.42/98.84) LLPYHIMGNGELHQISKR.LPKTV.DELLEINgIGkvKSNKYG..ARILEVVDQVVRE.HSSSDKTRNKVSAASMPKRQRDAPDS
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