<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26364

Description Uncharacterized protein
SequenceMQHAGDLKERCTGILLPLVAVALQLVERVLDPIPLTLVSVSQQQQGTRTPQLTPYRLKCEKEPLNPRLGPPDFYFPAPDCPEESLTRDTCTNGYKEAIEGIEEARETTWTLATNNALWAKENISRYKESLRKRLRAVTNALVRKRKAGQVYDVPLVGALLAKAGQFPERHTYGEDYRKKWIEDLSQRKRLSLLAEHVPHGFHRRTLFEALVKQNVPFLRATWFIKISYLNQVRPASSAGADKSHGKRLEQWTRDVLDYAQSVLDEICSNASRAALAQAYDSVQSVETDLDGHAKWHYIVRLVQWQYAEGLLQQSHVVEWALKQIQEKESLDGLELLLPVLLEFMDSLSLSQVHVRMLVDICQHWLRQLGVSNVLPSPEEQPQQYRIVVTFVEIMRYLLVAVPDTFVAFDCFPLLPCVTTLEGMEIVKDGDPKADTTKGNGRPGNLCPYREVYIMEVVDSIQKRASSLTKAVNPGVLRNNDGKVIQALDKSLAAGDLLSAFQAVFDSDFSGYDQLPGEWKTSSSNLPFLSGMLNNVNLSDLFAVRYLCEWAVCDFRDTRQASSIKVSTGIKDLSRIYTAASVLLLKKDFPPGSHAKKARVKGASDSKLKRSPMHEIIVAWIDQHDSRKGESMEKMQLLLYELVRRGIFHPDAYVRQLIVEGLLERRESPSDISRAARHRRVLRYLPGLPTLDLDDTKDTDDIPENARLYRNERRLALHGFHSDDKIAKDRRLKDRTYSSEVKVPMSGSFVTNTLDRKQVSRKPMKLLEVKQAVCAYLQIPDTLAGQQKFCAGPVGILKRVAGSSIGDTHGCEECNGSKRLKTGESKGTGFIADPEDSWWIKKVPKVSDPVKLEASIKPPKQGVRGRPKTVRKTQSLAQLHSARVDGGQGASSSHSFDSKVHCPYHRPAASTKLSLNDLRPKNDFRSIGSALKQLTVSEKFNFSSWLDRTIRSLLGEGTANKTGPTARCQLSDEQFGAVVYMLDMVFDYNVLVRLLLWLLPMAAGTSGMSARAPVNNKETCGIGEAAILSCLRRYELVITSLNLLPEVLTVGIQCASSVIGTIPSGRSQILIYVSELLNKYKGLMTVQSWQKTWRGSCDQKVAMELEALKVGDSESALGFINTVGEDRDDPIPQRLNSRLARVGASMKDSVQKALGEAVSQIVSKERELQTANFAIKDAVAEKVEEYSHRVVTGLLEAIKQNGTAQTDSGLVNAAVSALVSSASSSAANAHEVLTANNAGPDISLRCARRILQLHVRCLRLLKDGLDDRQSRVLDVSLASEASTIVAGHFVHIPGRAPRSQFHLSPETPELGTLGNDFAAGQNVITSGRAASATALVVMAVVHGVLSLERLVTVLKIRDGLEALHLPKLFGSSNGLSRGVAMGSTLKSDEVHIHWFRILIGDCKAIAGGLVADILGDATLVALARTQRLLPLNLVFPMAYAMFCGLLRRQVLSRMSNASRDDSILQSLSVAVADIVKHEPFREVCLQDTRALYVLLSSDGGSSDYAALLDEQGFDARLKVEAMLPFSGRLFLHSILDGVLPSSMQWQDDEAWVKVRHVHDPKHAQQQMVLILDELQPATFHWQWLELRLHLNELVFVEKIEAHNSAVKAMQASVGASDQLYECEKVFTENVLTNVLFRPDAGALYSEVLHSLGKPLEEYIIKLVKWSLQGVDVLYGKKSLRQRLEQTKGYIRPTSALKSWGWQPPWSVVEAASPEEGEVSQDNASAAGGSSRDDALSLHFAIEKALADLVLPCLARSLNDTCSGFAFDLVSQMAELEQQVTLLTRSSAKFSVAPSTADGPAAKNQRRGARSGLETASPSVRRRPPEASAVSAAALQSSMWLRLQFLLPLLRIIYCDRENMRLTLAPVLLRLLGTRVVYESAESFGIHQPESSMLNKGQWNAELASMAAAASAGEELFDRLLSVLHALLSNTWAVWLKPRGRAAKPPREVPPFEREAAEKLQTELDHMQLPMSLRMRLQAAMPVFPPGPTFSLSAAPPQVPQSAFTALQANLSPSLHLSHSQKLGADLKSKPSPSLDTETGMDPWLLLEDGTGLPATVGSANSSTTADGSTLKACPWLKGAVRVRRTELTHLGSVDSDT
Length2096
PositionKinase
OrganismSelaginella moellendorffii (Spikemoss)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Lycopodiopsida> Selaginellales> Selaginellaceae> Selaginella.
Aromaticity0.06
Grand average of hydropathy-0.201
Instability index42.52
Isoelectric point8.50
Molecular weight231270.26
Publications
PubMed=21551031

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP26364
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.15|      19|      25|    1729|    1747|       1
---------------------------------------------------------------------------
 1729- 1747 (30.64/20.96)	SRDDALS.LHFAIEKALADL
 1755- 1774 (28.51/18.92)	SLNDTCSgFAFDLVSQMAEL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.61|      24|     183|     337|     364|       2
---------------------------------------------------------------------------
  337-  364 (35.86/34.51)	LPVLLEFMDSLSLSQVH.VRMLvdiCQhW
  525-  549 (41.75/25.51)	LPFLSGMLNNVNLSDLFaVRYL...CE.W
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.12|      21|     184|    1045|    1087|       3
---------------------------------------------------------------------------
 1045- 1065 (36.52/56.75)	EVLTVG.IQCASSVIGTIPSGR
 1105- 1126 (30.60/ 7.04)	EALKVGdSESALGFINTVGEDR
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      95.47|      29|      29|    2015|    2043|       4
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 2015- 2043 (52.33/29.61)	LSHSQKLGADLKS.KPSPSLDTET.GMDPWL
 2045- 2075 (43.13/23.09)	LEDGTGLPATVGSaNSSTTADGSTlKACPWL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.77|      23|      28|     660|     687|       5
---------------------------------------------------------------------------
  662-  684 (38.98/31.89)	LERRESPSDISRAARHRRVLRYL
  692-  714 (39.79/16.24)	LDDTKDTDDIPENARLYRNERRL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      98.67|      33|      53|     844|     878|       6
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  844-  878 (52.13/40.84)	KVSDPV.KLEASIKPPKQGVrgRPKT.VRKTQS.LAQL
  898-  933 (46.54/29.14)	KVHCPYhRPAASTKLSLNDL..RPKNdFRSIGSaLKQL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.52|      29|     185|    1448|    1526|       7
---------------------------------------------------------------------------
 1136- 1166 (43.77/ 8.32)	SRLArvGASMKDSVQKALGEAVSQIVSKE..RE
 1451- 1481 (44.75/108.34)	SRMS..NASRDDSILQSLSVAVADIVKHEpfRE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.99|      28|      46|     257|     286|      11
---------------------------------------------------------------------------
  257-  286 (40.10/31.93)	DYAQSVLDEicSNASRAALAQAY..DSVQSVE
  305-  334 (42.89/26.46)	QYAEGLLQQ..SHVVEWALKQIQekESLDGLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.91|      23|      30|     423|     445|      12
---------------------------------------------------------------------------
  423-  445 (40.78/27.74)	MEIVKDGDPKADTTKGNGRPGNL
  454-  476 (37.12/24.49)	MEVVDSIQKRASSLTKAVNPGVL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.26|      11|      30|    1285|    1295|      13
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 1285- 1295 (22.38/14.21)	AGHFVHIPGRA
 1318- 1328 (19.88/11.75)	AGQNVITSGRA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.74|      15|      30|    1966|    1980|      14
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 1966- 1980 (28.49/17.63)	QLPMSLRMRLQAAM.P
 1996- 2011 (22.25/12.01)	QVPQSAFTALQANLsP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.08|      21|      31|     553|     575|      15
---------------------------------------------------------------------------
  553-  575 (26.38/28.07)	DFRDTRQASSIKVStGIKDlSRI
  587-  607 (36.71/26.44)	DFPPGSHAKKARVK.GASD.SKL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.41|      11|     270|     957|     967|      16
---------------------------------------------------------------------------
  957-  967 (22.65/13.30)	TANKTGP..TARC
 1233- 1245 (17.76/ 8.76)	TANNAGPdiSLRC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      94.36|      31|    1358|       5|      38|      18
---------------------------------------------------------------------------
    5-   38 (47.14/41.67)	GDLKERCTGILLPLVA....VALQLVERVLdpiPLTLV
 1399- 1433 (47.22/31.86)	GDCKAIAGGLVADILGdatlVALARTQRLL...PLNLV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.81|      14|    1358|     291|     304|      20
---------------------------------------------------------------------------
  291-  304 (29.42/20.62)	GHAKWHYIVRLVQW
 1651- 1664 (26.39/17.68)	GKPLEEYIIKLVKW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     161.11|      51|      55|    1826|    1876|      21
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 1826- 1876 (86.62/49.95)	SAVSAAALQ..SSMWLRLQFLLPLLRIIYCDR..ENMRLTLAPVLLRLL.GTRVVY
 1878- 1933 (74.49/41.91)	SAESFGIHQpeSSMLNKGQWNAELASMAAAASagEELFDRLLSVLHALLsNTWAVW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.72|      28|     614|     137|     168|      24
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  137-  168 (44.05/36.93)	VTNALVRK...RKAGQVYDV.PLVGALLakagQFPE
  749-  780 (41.67/25.18)	VTNTLDRKqvsRKPMKLLEVkQAVCAYL....QIPD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP26364 with Med12 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PSTADGPAAKNQRRGARSGLETASPSVRRRP
2) SHSQKLGADLKSKPSPSLDTETGMDPWLLLEDGTGL
3) VKLEASIKPPKQGVRGRPKTVRKTQSLAQLHSARV
1792
2016
849
1822
2051
883










Molecular Recognition Features






MoRF SequenceStartStop




NANANA