<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26301

Description Uncharacterized protein
SequenceMTAEKSTLISVAAMTSVAVAVNGGPGSRGNGSRRAVRWAVENLSADADTLILIHVMPAITSIPTPSGEQIPINELDANVVELYVQDMRAKFEQIFLPFKKLCKTLNVETLVLEGKNPATVLLRYASESGIKSLVLGSCFSNCILRKLRGPGVPSTVLRYAPDTCDVYVISRRRLRKKSTNPSSFSKTSSRHWFVTRRKLTEGPNGINEQISGFSTLGSKVRKIFGASSLSELSFSSSQAFTHQGSTNASIDQESYHQNLGDNNQETLTVKSCNSMASTKSEQAEVEKLRLELQDAVSMYERACEELVHTQSKVQILSSECIEERRKVNAALEREGTFRKIASEEKAKHLETMEEVEVAKNLLAIEVNGRQIAELHALKESSEKQKIVDELFSSDKRYRKYTKDEIEVATDFFSESRVIGEGGYGKVYKGNLDHTPVAVKVIHSDACDRKEEFLREVEVLSHLRHPHMVLLLGACPESGCLVYEYMENGSLDKHIFRQDGRMPLPWFVRFQIIFEVACGLAFLHSSKPEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAVPDNITEYRDSILAGTLFYMDPEYQRTGTIRPKSDVYAFGVIILQLLAARHPNGLILTVENAITNGTFADTLDKSIADWPIAETEELACLALKCSKLRCRDRPDLETEVLPVLKRLADFADASKRVEINNTSAPKHYFCPILQEVMEDPHIAADGFTYEHRAIKAWLDRHDVSPVTKWTFQHKMLTPNQTLRSAIQEWRCRVESSSN
Length769
PositionTail
OrganismVitis vinifera (Grape)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> Vitales> Vitaceae> Viteae> Vitis.
Aromaticity0.07
Grand average of hydropathy-0.309
Instability index48.39
Isoelectric point6.63
Molecular weight86112.22
Publications
PubMed=17721507

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP26301
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.35|      24|     146|     456|     494|       1
---------------------------------------------------------------------------
  143-  167 (40.68/18.29)	ILRKLRGPGVPsTVLRYAPDT.CDVY
  458-  482 (41.67/47.75)	VLSHLRHPHMV.LLLGACPESgCLVY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      86.45|      26|     176|     234|     259|       3
---------------------------------------------------------------------------
  213-  232 (22.79/13.36)	......FSTLGSKVRKIFGASSLSEL
  234-  259 (43.12/32.39)	FSSSQAFTHQGSTNASIDQESYHQNL
  269-  287 (20.55/11.25)	VKSCNSMASTKSEQAEVEK.......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.20|      23|     397|      23|      47|       5
---------------------------------------------------------------------------
   23-   47 (36.26/31.73)	GGPGS..RGNGSRRAVrwAVENLSADA
  421-  445 (37.94/24.42)	GGYGKvyKGNLDHTPV..AVKVIHSDA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP26301 with Med32 domain of Kingdom Viridiplantae
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