<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26265

Description Predicted protein
SequenceMASPYSSDDIHSPVNSTVVAIDKEKHSHYAVRWAVDHLLNMIHKPVMILVHVRSKNSNHGANLNNDDLNQLFIPYRGYCARKGVVLDDSDVAKAILDYINNNLVNNLVMGASSKNSFARSFMFSKPHEVQSSIMKSTPDFCSVYVISKGGKVQSSRPAQRPITNTLAPPRVPSSGFLIQSLSDSEQDLIPRVQRSARNKPNETTYPHNRAFNTTQKSYKNTINGSMDLNNGFNQVAFQRNPTLQSSFSDESEVGLGMMGSIDLSAHNNMDFYHGASSSSEESIPQSTKDIEAEMRRLKLELKQTMDMYSSACKEALTAKRKANELNQWKIEEARKFEKARLSEEAALAVAEMEKAKCRTAEEAAEKAQRMAELEGQRRKQAEMKAISEEKDKDRAVSALAHNDVRYRKYTIEEIEEATEQFANHRKIGEGGYGPVYNGELDHTPVAIKVLRPDAAQGKKQFQQEVEVLSSIRHPHMVLLLGACPEYGCLVYEFMENGSLEDRLFRRGNSPPLSWRKRFEIAAEIATALSFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPASVANSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDVYSFGILLLQIITARPPMGLAHQVSRAISKGTFKEMLDPVVHDWPLQEAQSFATLSLKCAELRKRDRPDLGKEVVPHLIRLKNFGNDVDLIRGDERTKEWI
Length707
PositionTail
OrganismArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Camelineae> Arabidopsis.
Aromaticity0.07
Grand average of hydropathy-0.518
Instability index43.64
Isoelectric point8.21
Molecular weight79429.21
Publications
PubMed=21478890

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP26265
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.66|      19|      20|     343|     361|       1
---------------------------------------------------------------------------
  343-  361 (31.61/19.78)	EEAALAVAEMEKAKCRTAE
  364-  382 (30.04/18.46)	AEKAQRMAELEGQRRKQAE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     136.00|      42|      49|     580|     625|       2
---------------------------------------------------------------------------
  580-  625 (73.34/59.92)	HMTSAA...GTF.CYIDPEYQQTGMlttkSDVYSFGILLLQII....TARPPMG
  628-  677 (62.66/42.04)	HQVSRAiskGTFkEMLDPVVHDWPL....QEAQSFATLSLKCAelrkRDRPDLG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.08|      20|      20|     113|     132|       3
---------------------------------------------------------------------------
  113-  132 (36.54/27.62)	SKNSFARSFMFSKPHEVQSS
  136-  155 (36.53/27.61)	STPDFCSVYVISKGGKVQSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     103.85|      28|      33|     245|     277|       4
---------------------------------------------------------------------------
  224-  243 (19.29/ 8.22)	..............GSMDLnNGFNQVAFQRNPTL
  245-  277 (44.43/49.63)	SSFSDESEvglgmMGSIDL.SAHNNMDFYHGASS
  286-  310 (40.13/30.28)	STKDIEAE.....MRRLKL.ELKQTMDMY...SS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.86|      17|      20|      59|      75|       7
---------------------------------------------------------------------------
   59-   75 (31.20/20.01)	HGANLNNDDLNQLFIPY
   82-   98 (25.66/15.32)	KGVVLDDSDVAKAILDY
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP26265 with Med32 domain of Kingdom Viridiplantae
Unable to open file!