<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26263

Description Kinase
SequenceMARPHPSDDGHTLVNSTVVAIDKDKNSHYAVRWAVDHLFNMVNNAKMILVHVRLKNSNHGGNIDDNELNQLFVPYRGYCARKGISMIEVILDDTDVAKAVLDYVNNNLVTNLVLGSSSKSPFARSLKFTKSHDVASSVLKSTPEFCSIYVISKGKVHSSRTAQRPITNTLVPPRAPSSTFHLPDPDHVHSPRGQRNARNTVPERYSHDNKGFKPVREMHKIPTNGSLDFNYEFRQAKGQRNSTGRSSFSDDADVGSMMMMGSIDLSAENFDMVGASGSSDESVSQSTRDIEAEMKRLKIELKQTMDMYSSACKEALNAKKKANELNQWKLEEARRFEEARNAEEAALAVAEMEKAKCRAALEAAEKAQRMAELEGQRRKQAEMKARRESQEKDRALSALVQNDVRYRRYSIDEIEVATERFANNRKIGEGGYGPVYHGTLDHTPVAIKVLRPDAAQGKKQFQQEVEVLSSIRHPHMVLLLGACPEYGCLVYEFMDNGSLEDRLFRRGNSPPLSWRKRFQIAAEIATALSFLHQAKPEPLVHRDLKPANILLDKNYVSKISDVGLARLVPASVANTVTQYHMTSAAGTFCYIDPEYQQTGKLTTKSDIFSLGIMLLQIITAKSPMGLAHHVSRAIDKGTFKDMLDPVVPDWPVEEALNFAKLCLKCAELRKRDRPDLGKEIVPELLRLRSLGKDNEPGCHK
Length700
PositionTail
OrganismArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Camelineae> Arabidopsis.
Aromaticity0.06
Grand average of hydropathy-0.522
Instability index40.61
Isoelectric point8.87
Molecular weight78384.35
Publications
PubMed=21478890

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP26263
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      47.00|      10|      21|     313|     322|       1
---------------------------------------------------------------------------
  313-  322 (16.10/10.78)	KEALNAKKKA
  337-  346 (15.84/10.47)	EEARNAEEAA
  358-  367 (15.07/ 9.57)	RAALEAAEKA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     304.98|      85|     255|     149|     233|       2
---------------------------------------------------------------------------
  149-  233 (153.97/105.24)	YVISKGKVHSSRTA.QRPITNTLVPPRAPSSTFHLPDPDHVHSPRGQRNARNTVPERYSHDNKGFKPVREMHKI......PTNGSLDFNYEF
  237-  268 (28.06/12.79)	............................................KGQRN..STGRSSFS.DDADVGSMMMM............GSIDLSAE.
  409-  493 (122.95/82.47)	YSIDEIEVATERFAnNRKIGEGGYGPVYHGTLDHTPVAIKVLRPDAAQGKK.....QFQQEVEVLSSIRHPHMVlllgacPEYGCL..VYEF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP26263 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) TAQRPITNTLVPPRAPSSTFHLPDPDHVHSPRGQRNARNTVPERYSHDNKGFKPVREMH
161
219










Molecular Recognition Features






MoRF SequenceStartStop




NANANA