<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26248
Description |
Structural constituent of ribosome |
Sequence | MAVAPSDFQPTLWDSVTSLIRSTQEKNVDPLQWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSWKLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPQIRAPGYHKTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIIWQLVDASLDEEGLLELTSNKRSKWPSRPHDMEIDGLENSVKRNENHDALEKANTEIAIELIQDFLQNKVTSRILHLASQNMESRTIPRGEFHAIVSSGSKLALNSDSALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTTWHDAFLALWLAALRLVQRENLCLRYCFIIHMMEILSEERDPIEGPVPRTDTFLCVLLSVTPLAVANIIEEEESQWIDQTSSSPSNQCKEKKGKCRQGLVNSLQQLGDYESLLTPPRSVQSVANQAAAKAVLFISGITNGNGSYENTSMSESPSGCSGNMRHLIVEACISRNLLDTSAYLWPGFVIGGTNQVPEGIAGNISCWSLAMKGSPLTPSLTNSLITTPASSLAEIEKMYEVATTGSEDEKIAAASILCGASLFRGWSIQEHVIIFIVTLLSPPAPADLSGSYSHLISSAPFLNVLLVGISPIDCVHIFSLHGVVPLLAGALMPICEAFGSGIPNITWTLPTGEVISSHAVFSTAFTLLLRLWRFDHPPLDYVLGDVPPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARRRFSKVINISVDPIFMDSFPRLKQWYRQHQECMASILSELKTGSPVHHIVDSLLSMMFKKANKGGSQSLTPSSGSSSLSTSGVDDSSDQLKLPAWDILEAAPFVLDAALTACAHGSLSPRELATGLKILADFLPATLGTMVSYFSSEVTRGLWKPVSMNGTDWPSPAANLASVEQQIEKILAATGVDVPRLPADGISAATLPLPLAALVSLTITYKLDKATERFLVLVGPALDSLAAACPWPCMPIVTSLWTQKVKRWSDFLIFSASRTVFHHNRDAVIQLLRSCFTCTLGLTPTSQLCSYGGVGALLGHGFGSRYSGGISTAAPGILYIKVHRSIRDVMFLTEEILSLLMFSVKSIATRELPAGQAEKLKKTKDGSRYGIGQVSLSLAMRRVKLAASLGASLVWISGGLNLVQALIKETLPSWFISVHGEEDELGGMIPMLRGYALAYFAILSSAFAWGVDSSSPASKRRPRVLWLHLEFMVSALEGKISLGCDWATWQAYVTGFVSLMVQCTPAWVLEVDVEVIKRLSKSLRQWNEQDLALALLCAGGLGTMGAATELIVETCHQH |
Length | 1297 |
Position | Tail |
Organism | Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Brassicales> Brassicaceae> Camelineae> Arabidopsis.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.155 |
Instability index | 50.03 |
Isoelectric point | 6.02 |
Molecular weight | 141447.74 |
Publications | PubMed=21478890
|
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:EnsemblPlants
|
GO - Biological Function | |
GO - Biological Process | phenylpropanoid metabolic process GO:0009698 IEA:EnsemblPlants
regulation of phenylpropanoid metabolic process GO:2000762 IEA:EnsemblPlants
|
Interaction
Repeat regions
Repeats |
>MDP26248
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 398.08| 96| 103| 528| 623| 1
---------------------------------------------------------------------------
413- 515 (99.51/63.37) ..LVNSLqqLGDYESLLTPPRSVQSVANQAAAKAVLFISGITNGN..GSYENTSMSE.............SPSGCSGNMRHLIVEACISRNLLdtsaylwpgfviggtnqvpEGIAgNIS
528- 623 (154.84/103.55) PSLTNSL..ITTPASSLAEIEKMYEVATTGSEDEKIAAASILCGA..SLFRGWSIQEHVIIFIVTLLSPPAPADLSGSYSHLISSAPFLNVLL...................VGIS.PID
635- 725 (143.74/95.48) PLLAGAL..MPICEAFGSGIPNITWTLPTG...EVISSHAVFSTAftLLLRLWRFDHPPLDYVLGDVPPVGPQP.SPEYLLLVRNC...RLEC...................FGKS.PKD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 107.39| 44| 56| 863| 918| 2
---------------------------------------------------------------------------
5- 49 (44.32/21.68) PSDFQPTLWDSVTSLIRSTQEknvdplqwalQLRLTLASAGISLP................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
863- 871 (-1.04/ 9.00) .............................................spdlaqflvthifwenhsplswkllekaisvnivppllvlallsprvipnrklhpaayrlymellkrhafsfmpqirapgyhktmnsiddilhlsetfgvqdqepgsillafvfsiiwqlvdasldeeglleltsnkrskwpsrphdmeidglensvkrnenhdalekanteiaieliqdflqnkvtsrilhlasqnmesrtiprgefhaivssgsklalnsdsalwlpidlffedimdgtqaaaasavenltglvkalqaansttwhdaflalwlaalrlvqrenlclrycfiihmmeilseerdpiegpvprtdtflcvllsvtplavaniieeeesqwidqtssspsnqckekkgkcrqglvnslqqlgdyeslltpprsvqsvanqaaakavlfisgitngngsyentsmsespsgcsgnmrhliveacisrnlldtsaylwpgfviggtnqvpegiagniscwslamkgspltpsltnslittpasslaeiekmyevattgsedekiaaasilcgaslfrgwsiqehviifivtllsppapadlsgsyshlissapflnvllvgispidcvhifslhgvvpllagalmpiceafgsgipnitwtlptgevisshavfstaftlllrlwrfdhppldyvlgdvppvgpqpspeylllvrncrlecfgkspkdrmarrrfskvinisvdpifmdsfprlkqwyrqhqecmasilselktgspvhhivdsllsmmfkkankggsqsltpssgssslstsgvddssdqlklpawdileaapfvldaaltacahgslsprelatglkiladflPA..........TLGTMVS
884- 939 (64.12/33.78) PVSMNGTDWPSPAANLASVEQ..........QIEKILAATGVDVP...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................rlPAdgisaatlplPLAALVS
---------------------------------------------------------------------------
|