<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26229

Description Predicted protein
SequenceMWLPKANGAKKETGSGSVAVAIDKDKGSQHALKWTIDNLASRGQTISLIHVLSRSHSSSDLEEGTPQQRQQSEKIAKDLFVSFHCYCSRKEINCRDILLEDADKVRAITEYVSSSAIENLVVGSASRNGFMRRFKTDLPTTVSKSAPDFCNVYVISKGKIASVRNASRPAPYQNSMQHCEIDNHHPHTPDKAPKHHDHSNSAGSTPSRPRKSVEVDATRSPLVKRKPYGDLYDSDSDLSFISPSSHRDSDISFISSGRPSVERSSFSLDFPESARTSRMSTSSEQSIGSHRLGIKFSDPGFPNESSTFSEESGRTSSYSSQSLDDVEAEMKRLRLELKQTMDMYSTACKEALSARQQATELQKLRTEEERRLEEAKSSEEAAMSIVEKERAKAKAALEAAEAAKRLAEVEAKRRLTAEMKTLKESDSFSRRFVRYRKYTVEEIEEATSNFAESQKVGEGGYGPVFRGFLDHTSVAVKVLRPDAAQGRSQFQKEVEVLSCIRHPNMVLLLGACPEFGILVYEYMAKGSLEDRLFMRGNTPPITWQLRFRIAAEIATGLLFLHQTKPEPIVHRDLKPGNVLLDYNYVSKISDVGLARLVPAVAENVTQYRVTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQILTAKQPMGLAYYVEQAIEEGTLKDMLDPAVPDWPMEEALSLAKLSLQCAELRRKDRPDLGKEILPELNRLREIGEESLESVFYAGSQGKSPHTSQVSISSSVSVSSL
Length752
PositionTail
OrganismArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Camelineae> Arabidopsis.
Aromaticity0.07
Grand average of hydropathy-0.503
Instability index51.69
Isoelectric point6.69
Molecular weight83583.32
Publications
PubMed=21478890

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP26229
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      94.17|      35|      38|     327|     363|       1
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  327-  363 (49.55/37.36)	EAEmKRLRlELKQTMD.MYSTACKEALSARQ..QATELQK
  367-  404 (44.62/24.99)	EEE.RRLE.EAKSSEEaAMSIVEKERAKAKAalEAAEAAK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.52|      24|      36|     197|     231|       2
---------------------------------------------------------------------------
  206-  229 (42.31/31.37)	PSRPRKS.VEVDATRSPLVKRKPYG
  243-  267 (36.22/15.15)	PSSHRDSdISFISSGRPSVERSSFS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     172.67|      54|     348|      88|     148|       3
---------------------------------------------------------------------------
   88-  148 (79.95/61.00)	SRKEINCRDILLEDadkvraITEYVSSSAiENLVVGSASRNGFMRRFKTDLPTTVSKSAPD
  429-  482 (92.73/54.65)	SRRFVRYRKYTVEE......IEEATSNFA.ESQKVGEGGYGPVFRGFLDHTSVAVKVLRPD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP26229 with Med32 domain of Kingdom Viridiplantae
Unable to open file!