<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26227

Description Kinase family protein
SequenceMYARRVRGTSADYGTITAIAIDKDKNSQHALKWAVENIVVDTPQCVLLHVQLGNTGGHFHQDNQDEAHQFFLPFRGFCARKGIIAKEVILHDIDISNAIVNYITNNYYIANLVVGASARNSFLKKFKSPDVPTTLLTTTPETCAVFVVTKGRLLKSRSASHPHKLSRQQNLSSLLYNSTSSVSNDSDRESLSSPVSTQTNKPNSDFFQPNSPRISPPPSMSEISQSETDNGSSDMVSTVSSYTVSESSTTIGSSISSTSTESPHAGNFVEQQNQNLEAEVRKLRLELKQFKMDKDTTNQNENSQESPRSDEKIELPRALSEREKQKKQSAIQAAEIAKRIAKMESQKIRLLEMQANLDKQKMVTTVSYRRYSIKDVEGATYGFSDALKIGEGGYGPVYKAVLDYTPVAIKILKSGITEGLKQFRQEIEVLSSMRHPNMVILLGACPEYGCLVYEYMENGTLEDRLFCKNNTPPLSWRARFRIASEIATGLLFLHQAKPEPLVHRDLKPANILLDKHLTSKISDVGLARLVPPSVSDSYSNYHMTSAAGTFCYIDPEYQQTGMLGVKSDVYSFGVVLLQIITAQPAMGLGHKVEMAIENNNLREILDPTVSEWPEEETLELAKLALQCCELRKKDRPDLALVLLPALNRLKEFATEDHERIQDRTSHVSHEHNSVPLSPIPSSQVSFLEPFFLRDLSCKSNFRKFHTH
Length707
PositionTail
OrganismArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Camelineae> Arabidopsis.
Aromaticity0.07
Grand average of hydropathy-0.424
Instability index43.82
Isoelectric point6.88
Molecular weight79047.64
Publications
PubMed=21478890

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP26227
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     254.49|      83|     161|     380|     474|       1
---------------------------------------------------------------------------
  380-  474 (121.70/122.97)	TYGFSDAlKIGEGGYGPVYKAVLDYTPVAIKILKSGITEGLKqfrQEIEVlsSMRHPNMVILLGacPeygcLVYEYMENGTLE.DRL...FC...KNNTPPL
  549-  638 (132.79/93.45)	TFCYIDP.EYQQTGMLGVKSDVYSFGVVLLQIITAQPAMGLG...HKVEM..AIENNNLREILD..P....TVSEWPEEETLElAKLalqCCelrKKDRPDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.94|      17|      19|     169|     187|       5
---------------------------------------------------------------------------
  169-  187 (23.07/20.84)	QNLSSLLynSTSSVSNDSD
  189-  205 (29.87/18.63)	ESLSSPV..STQTNKPNSD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.07|      16|      33|     311|     326|       6
---------------------------------------------------------------------------
  311-  326 (24.77/16.37)	EKIELPRALSEREKQK
  332-  347 (24.30/15.92)	QAAEIAKRIAKMESQK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP26227 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) VSNDSDRESLSSPVSTQTNKPNSDFFQPNSPRISPPPSMSEISQSETDNGSSDMVSTVSSYTVSESSTTIGSSISSTSTESPHAGNFVEQQNQNLEAEVRKLRLELKQFKMDKDTTNQNENSQESPRSDEKIELPRALSEREKQKKQ
182
328










Molecular Recognition Features






MoRF SequenceStartStop




1) RKLRLELKQF
281
290