<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26217

Description Kinase
SequenceMATRRLKGKDSKAVTAIAIDKDKNSQHALKWAVENIIIDSPNCILLHVQTKLRIGAGENTEAPHDNQEEAHQFFLPFRGFCARKGIIATEILLHDIDISSAIVDYITNNSISNLVLGASARNSFLKKFKSADVPTTLLKTTPDTCAVFIVSKGKLLTSRSASRPQTPQGPQTPQGPHTSQGPLTPQGPQHAPHPLKHPVMMSDPGPTSSTSSESGRSPPALNGELSPPTPHYKQSFNRSSMSELSNESPSGHSAESNASFYSILGRSTYGGSSHSSMSEMTDGEESLSGGNITEHQNQNLEAEVRRLRLELHQFNASICRESAPHLQGPRATAETEKLEEAKAAREMLRALSEMDKQKTQSAIQATEMAQRLAEIETQKRRLVEMQAKFKEQNMADSISYRRYSIRDVEGATDGFSDALKIGEGGYGPVYKAVLENTSVAIKILKSDVSQGLKQFNQEIEVLSCMRHPNMVILLGACPEYGCLVYEYMENGTLEDRLFCKDNTPPLSWRARFRIAAEIATGLLFLHQAKPEPLVHRDLKPANILLDRYLISKISDVGLARLVPPTVADSFSNYHMTAAAGTFCYIDPEYQQTGMLGVKSDLYSFGVVLLQIITAMPAMGLSHRVEKSIEKKTFREVLDPKISDWPEEETLVLAQLALQCCELRKKDRPDLASVLLPALSKLREFATENHEVHNSDKTFHVSRAQNSVPLSPISSSQTDDAWENPFDRKIGTST
Length733
PositionTail
OrganismArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Camelineae> Arabidopsis.
Aromaticity0.06
Grand average of hydropathy-0.436
Instability index48.17
Isoelectric point6.47
Molecular weight80903.73
Publications
PubMed=21478890

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP26217
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.90|      12|      16|     164|     177|       1
---------------------------------------------------------------------------
  164-  177 (22.32/14.65)	PQTPQGPQtpQGPH
  182-  193 (26.58/11.67)	PLTPQGPQ..HAPH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.76|      16|      18|     343|     358|       2
---------------------------------------------------------------------------
  343-  358 (27.32/18.10)	AAREMLRALSEMDKQK
  364-  379 (26.45/17.31)	QATEMAQRLAEIETQK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.05|      19|      35|     232|     251|       3
---------------------------------------------------------------------------
  232-  251 (32.06/26.51)	YKQSfNRSSMSELSN..ESPSG
  269-  289 (30.99/19.51)	YGGS.SHSSMSEMTDgeESLSG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP26217 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ICRESAPHLQGPRATAETEKLEEAKAAREMLRALSEMDKQKTQSAIQATEMAQ
2) LTSRSASRPQTPQGPQTPQGPHTSQGPLTPQGPQHAPHPLKHPVMMSDPGPTSSTSSESGRSPPALNGELSPPTPHYKQSFNRSSMSELSNESPSGHSAESNASFYSILGRSTYGGSSHSSMSEMTDGEESLSGGNITEHQNQNLEAEVRRL
318
156
370
307










Molecular Recognition Features






MoRF SequenceStartStop




1) FYSILGRS
260
267