<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26216

Description Kinase family protein
SequenceMWLPKADATNKGTRSGSVAIAIDKDKSSQNAIKWTLENLATRGQTLALIHVLPKSQSSLDIEEGITHKQQMEKQTKDLFVSFHCFCSRKEIHCLDVVLEDVDKVKAIVEYVTVSAIENLVLGAPSRNSFMRRFKTDLPTSVSKTAPDFCNVYVISKGKISSLRNASRPAPYHPSVLLSEVDNHETIALERKHKTANTPALPRGRRSVDSDGTRLGLPKPPHGHMKLVGDFSDSESEFSFISASQQESDLSFISSGRPSVDRSSFTYDLPESARTSRMSTSSEQSIGSHRLGIKFTDLSYLNGSSTVSDESGRTSCSYSSQSLDDVEAQMRRLRLELKQTMDMYSSACREALTARHEATELQKLRTEEERRLEELKMTEEIAMSMVENERAKAKTALEAAEAANRLAEVEAKRRVHAEMKVLKESDSFSRHSIVRYRKYTVQEIEEGTANFAESRKVGEGGYGPVFRGHLDHTSVAVKVLRPDAAQGRSQFHKEVEVLSCIRHPNMVLLLGACPEYGILVYEYMAKGSLDDRLFRRGNTPPISWQLRFRIAAEIATGLLFLHQTKPEPIVHRDLKPGNVLLDHNYVSKISDVGLARLVPAVAENVTQYRVTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLLTAKQPMGLAYYVEQAIEEGTLKDMLDPAVPDWPLEEALSLAKLSLQCAELRRKDRPDLGKEVMPELNRLREIGEESLESVFYAGQGRSSHPSQVSYTSVRVFNSKTFPSDN
Length757
PositionTail
OrganismArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Camelineae> Arabidopsis.
Aromaticity0.06
Grand average of hydropathy-0.434
Instability index51.92
Isoelectric point6.75
Molecular weight84533.89
Publications
PubMed=21478890

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP26216
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     114.80|      40|      43|     337|     378|       1
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  331-  372 (59.11/43.34)	RLRLELKQTMDMYS...SACREALTARHEATELQKLrtEEERRLE
  373-  415 (55.69/34.56)	ELKMTEEIAMSMVEnerAKAKTALEAAEAANRLAEV..EAKRRVH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.86|      16|      45|     248|     265|       2
---------------------------------------------------------------------------
  248-  263 (29.89/18.16)	DLSFIS........SGRPSVDRSS
  296-  319 (23.97/ 7.53)	DLSYLNgsstvsdeSGRTSCSYSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     125.37|      43|     327|      97|     147|       3
---------------------------------------------------------------------------
  105-  147 (74.92/62.78)	KAIVEY..VTVSAIENLVLG.APSR....NSFMRRFKTDLP.TSVS.KT.APD
  430-  482 (50.45/26.83)	HSIVRYrkYTVQEIEEGTANfAESRkvgeGGYGPVFRGHLDhTSVAvKVlRPD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.93|      18|     243|     483|     501|       7
---------------------------------------------------------------------------
  483-  501 (26.89/20.27)	AAQGRSQFHKEVEVLScIR
  729-  746 (33.04/19.14)	AGQGRSSHPSQVSYTS.VR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP26216 with Med32 domain of Kingdom Viridiplantae
Unable to open file!