<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26178

Description Uncharacterized protein
SequenceMIMANNLLDAPPQSRDRLLDGSTQQLQEALRCNIADVRKRNEALSFRNSPAKVLFHRKSFANPVSVQFLNSLSRESQLSTVSYFDHDGTGSSFAEKLDMLLTWSVTPLQYGDHRPLAVVTLLQHWCNRASERATRRGSQHPHAILQDHLFTWLDTSEVAGEVGNIQTVALLYGKLVKLELFSYPNYIQRLIARGEPGLSYSEPNPSRHRHFLSWIPLFNSTPSLIYQRKVTLYGVRARETPEDRIEKEIRREIRSILPELFGNSTPKQWASTAALLNDCSSLMAASRYEQALHPVTQHPDQVPPVLPEVYALARDPNPEAPSTLANSLWIKYRTSQDWAAKVWENTLSALSNVVASNPTGQDLEAIGLRYASFLMKVDQHLPTGLDGYICRWLETAGRNEMPFLQPQAWALLESLLLFLIIQGALKTTTVLAGLVYPAWQLVASSTINVDSPLIAYLTSARVLFQKLLLQDTASRDGTFPRDIFDIQKLRTRRRTVYYEPHFSKLVEMIPLLIYIESMEQLPQELRAELSTLRRHLCQDRRFRQGAYRNLDVIREAFETSPYLMDTSVESLRKEAVAGLRMILWDSTEDGDIDDWPEVSSLLSPWKLVATTIQMQFQVKQLGRALGQENTHAFASSNLDKLTLMLFQHTKTAEEAYYVGEMAKGADPTVATKFIKAGLKFMKDMLSDSQGDENCFATSLMRLGELLRILIHVTAPFRDQSVNLLALDPALQEEFLRLLHSKITYLERSLTSEERSAQDHNHKSNLILLIRLLQFVLNFRDISWTLAMKEVGQSLATALFRLAMHFGSGSHIDETIFPILTDTLIFIYDGEGIATRLRPPRTNQRLEMAPDPKAPAYDPFKHYPDTPPSSLPADLPAQYRQQILTLIARNPIPSTIANLSTAHRDSQGHYSAGGPVINRPWEWVENLTPDLQGIEDERTLFQNKCTVKNSGSLSLETFAARMTGDSIVRNLAQDSVNMLHELRIFEDGLSEESIFARDFRETRTSVETDLDIALKQPLAGLETSAGSLQPVIAGKMEPPSRASPASSVVSRSSAAQGSGSSKRMQHSPGQMSRLSTSTISDAMDVDSTGPSGLGSRRGSTTKRKADSDDDEIQIIEGPTRPAPGKRVRAGKAPAGKTVGSKTTAGKTRASTRKR
Length1153
PositionKinase
OrganismCoprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) (Inky cap fungus) (Hormographiella aspergillata)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes> Agaricomycetidae> Agaricales> Psathyrellaceae> Coprinopsis.
Aromaticity0.07
Grand average of hydropathy-0.336
Instability index48.88
Isoelectric point7.41
Molecular weight129069.28
Publications
PubMed=20547848

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP26178
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.51|      23|      27|     348|     374|       1
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  352-  374 (40.32/28.48)	NVVASNPTGQD......LEAIGLRYASFL
  376-  404 (36.19/16.18)	KVDQHLPTGLDgyicrwLETAGRNEMPFL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     116.50|      35|      60|     187|     225|       2
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  187-  225 (55.01/34.29)	IQRLIARGEPGLsYSEPNPsrhRHFLSWIPLFNSTPSLI
  249-  283 (61.49/28.27)	IRREIRSILPEL.FGNSTP...KQWASTAALLNDCSSLM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     111.04|      36|      77|    1035|    1075|       3
---------------------------------------------------------------------------
 1035- 1075 (53.03/46.79)	MEPPSRASPASSV.VSRSSAAQGSGSskrmQHSPGQmSRLST
 1114- 1150 (58.01/35.76)	IEGPTRPAPGKRVrAGKAPAGKTVGS....KTTAGK.TRAST
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.19|      16|      60|     452|     467|       4
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  452-  467 (27.33/16.02)	PLIAYLTSARVLFQKL
  510-  525 (28.86/17.31)	PLLIYIESMEQLPQEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.75|      25|      48|      98|     122|       6
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   98-  122 (45.32/29.54)	DMLLTWSVTPLQYGDHRPLAVVTLL
  147-  171 (43.42/27.99)	DHLFTWLDTSEVAGEVGNIQTVALL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.68|      18|      27|     866|     892|       7
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  299-  316 (33.78/10.62)	PDQVPPVLPEVY.....AL.ARDP
  867-  890 (23.91/30.12)	PSSLPADLPAQYrqqilTLiARNP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.72|      17|      26|     704|     720|       8
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  704-  720 (29.52/20.95)	ELLRILIHVTAPFRDQS
  733-  748 (25.72/17.21)	EFLR.LLHSKITYLERS
  770-  782 (21.49/13.03)	RLLQFVLN....FRDIS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.01|      13|      26|     954|     966|      12
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  954-  966 (21.83/16.16)	LETFAARMTGDSI
  981-  993 (21.18/15.42)	LRIFEDGLSEESI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.46|      15|     568|     321|     336|      15
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  321-  336 (25.31/19.28)	PSTLANsLWIKYRTSQ
  892-  906 (28.15/16.61)	PSTIAN.LSTAHRDSQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP26178 with Med12 domain of Kingdom Fungi
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