<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26145

Description Uncharacterized protein
SequenceMSAAGASAASPAASRESNGYTTTPWLDCFSFPCAAPTSTAPSSLPATVLPPAAAACSPARAPPETPSSPSDSSSMAPATTADDHHQPGLDGPRPAKMVKPSPDECAAAVEQQHQQQQQQQQQQQQQQQQKHQISSSPGSPVRRPEPDQMPQLAVDDEEDEFDDSDSAVGSDRSVLSRFSSSFVHQSSRLTAGEQR
Length195
PositionTail
OrganismArthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) (Trichophyton mentagrophytes)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Onygenales> Arthrodermataceae> Trichophyton.
Aromaticity0.04
Grand average of hydropathy-0.854
Instability index99.49
Isoelectric point4.66
Molecular weight20536.93
Publications
PubMed=21247460

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP26145
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.88|      29|      44|       6|      40|       1
---------------------------------------------------------------------------
    6-   40 (39.53/28.78)	ASAASPAasRESNGYTTTPwLDCFSFpcaAPTSTA
   53-   81 (54.36/21.55)	AAACSPA..RAPPETPSSP.SDSSSM...APATTA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     107.92|      32|      43|      82|     115|       2
---------------------------------------------------------------------------
   82-  115 (54.81/31.45)	DDHHQPGLDGPRPAKmvKPSPDECAA.AVEQQHQQ
  128-  160 (53.11/25.19)	QQKHQISSSPGSPVR..RPEPDQMPQlAVDDEEDE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP26145 with Med15 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) TAPSSLPATVLPPAAAACSPARAPPETPSSPSDSSSMAPATTADDHHQPGLDGPRPAKMVKPSPDECAAAVEQQHQQQQQQQQQQQQQQQQKHQISSSPGSPVRRPEPDQMPQLAVDDEEDEFDDSDSAVGSDRSVLSRFSSSFVHQSSRLTAGEQR
39
195










Molecular Recognition Features






MoRF SequenceStartStop




1) LPATVLP
2) PAKMVKPS
3) PGSPVRRPEPDQMPQLAVDDEEDEFDDSDSA
4) SDRSVLSRFS
44
94
137
170
50
101
167
179