<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26109
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MNHQQQSQSQSQQSPTIESTSQQQQQQPPQQQQTIKLSTVIHRLVQDSYNNLIGLTEISPSLKDVDKKRTLLDYFDQTRERFLRLLVILKWSSHIDTLTKANDIIQLLEKEDSFFREAADMLILTKENLINARAPIYDIPTAVDVMTSGTYQRMPVNIGMVLPPPILSNTEISRAIDKLNNIICYKLFLSDVPSEFEPIRVENGRAYLTVKNEYEAFLTIDGASEGKGPIKIRVDERVKEVTERIQNRLAHSKQPLHELHNIIHSLVVSAQLDSLSSQMDALKKTAFRSNIKCVQGKDLSLTIFFWISEEIANSVGSLDVKKHMNIKIYIDDSNKLHVSYTPNIQNARSDSSLRIPSLNIETILMRAMELHAHFRVQHLYNILFEDYLNKLKLQQHQQQQQQQLQLTSGTTNTNTPSSSGSSSSCKSFQINDFKMIFSSQHQQKQQSSNETSNIVTSTDDSLPTILRVQLYGSNYLDITVNQLTGKFNILLSSSKNHEIKSIVNTFKLRSLLSCFEEAALFMRLECFYKIPLVSQLFTEQNYICIRFPKYKDIYYLVISIHPTTFLPIFHLIYSKPSLNSAIFTVTPDTPAAAAATTAKPTTPTDTTTSTTTFTIGIAAATATATAAAATTAAVTAVTATATGASTTAAIETVSTGYLPFGETSVRDRQVSDQHCQCRAATDWLSSFKSDLIAINKIINLASQLVKQLRISKEFQSTFQILSIKPKEIEFICLNYSLSKSTIKIVVNKQNQIVLDYQPFVNPLLPFFEKDLNESMNMENLLHSIAISNEIVFSIQAIIYTPNSSTSQFLPLEIYVIPRSSTQIRLIYKNVYGIDIRFVSTENCIVEDAHYTNVMANLYPQVHRSKLMAIPYIHLIMEHRINVVALDNQGFRSSWLVPMRQFRASLQRIVLFMSCTFLFNILRSAIKVEFNDIMHQALTMKFSSETIQFHLNVRDYSTFELDASNKPEDQWRLVSPANHCKRSQHADGAASGVARIAQDSAWRPGASAPTPLHRRHLSVGSVVASRPRAIHPQARCTRRVHDTPILQSHKPACARSLRVNLYRYTDQLVVPSIHKTR |
Length | 1076 |
Position | Tail |
Organism | Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) (Heterostelium pallidum) |
Kingdom | Amoebozoa |
Lineage | Eukaryota> Amoebozoa> Evosea> Eumycetozoa> Dictyostelia> Acytosteliales>
Acytosteliaceae> Heterostelium.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.210 |
Instability index | 52.03 |
Isoelectric point | 9.00 |
Molecular weight | 121723.82 |
Publications | PubMed=21757610
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP26109
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 72.09| 15| 15| 619| 633| 1
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602- 616 (22.79/12.64) TPTDTTTSTTTFTIG
619- 633 (25.65/15.10) AATATATAAAATTAA
636- 649 (23.65/13.39) AVTATATG.ASTTAA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 96.95| 15| 15| 4| 18| 2
---------------------------------------------------------------------------
4- 18 (27.52/14.03) QQQSQSQSQQ....SPTIE
22- 36 (29.19/15.31) QQQQQQPPQQ....QQTIK
394- 412 (22.52/10.18) QQHQQQQQQQlqltSGTTN
441- 454 (17.71/ 6.48) HQQKQQSSNE....TSNI.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 35.01| 10| 589| 466| 477| 5
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466- 477 (15.00/14.95) LRVQLYgsNYLD
1056- 1065 (20.01/11.59) LRVNLY..RYTD
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 34.80| 12| 15| 100| 112| 6
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100- 112 (15.07/15.09) KANDIIqLLEKED
117- 128 (19.74/13.44) EAADML.ILTKEN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 37.46| 12| 381| 185| 199| 8
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185- 197 (16.58/19.09) YKLFLSdVPSEFE
204- 215 (20.88/ 8.10) GRAYLT.VKNEYE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.02| 15| 381| 137| 155| 9
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137- 151 (27.99/12.63) YDIPTAVDVMTSGTY
528- 542 (27.03/ 9.49) YKIPLVSQLFTEQNY
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