<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP26043

Description Uncharacterized protein
SequenceMDPRRAANAAAASAMYPTPPDAVQNPLGIFTAPAADAVTSSPGPPSSVAAPVDGDAPMVNAVVMADTEGDNWEPTDTKRDRGDSTFEGDDNLFGDMGPDMFGDTDITDADFSFFDEDDDNNPLDLNMSAPDTTMTGLPTTTPEPISLQADILPPSIDDPPEETKLKTEAPIFTKPELRHARSTLNDETRGRLTSDNSKALSNKREPSPFDPATVFKKVRASLGRLNDQSLGSSSTVTARKGSVFDSIEFDPVLPLASKKYEQGGRFACRWTPTQSDTSLSLKKPPTTDYLRRHSKSHRKPFRTDNTNARIRSITDGLENSSLQASPDRIEELSSDADDMSLESDVDESPELMEEPTSPFKASTKRLNLEDDMVSHVTSLRDVESVVEDTDPSLALDLPRIARFEVPEVAVAKYFDDPEPLLSQLSLQDDDIITVAQILTEQAISGNLCLRDAQSATFNSPVGSETRRQLASLSRTLSLVLQQAIPAAMGDSTQCQFRELIEASDVPLLGPPSRAQPRPVPPRDPNAEPPKPNYLFQIPPPHLEIKRLDSKLSVLPSTISFWETLGLGPSQGAKNITAACVFPNLNGLSDFATTFLGRIRNTYEFLKLGGFDIVNGESGHPTGGLVPWEEERLTGTPTVDGAMHGSSLADRMDSLNQSLLSLEAREKNFVVFIVYIPSHPESIVEACTAFSSSSNCIRKPLPTRGLLHQMSWCCNFYQWIS
Length720
PositionKinase
OrganismVerticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) (Verticillium wilt of alfalfa) (Verticillium albo-atrum)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Glomerellales> Plectosphaerellaceae> Verticillium.
Aromaticity0.06
Grand average of hydropathy-0.467
Instability index53.81
Isoelectric point4.59
Molecular weight78497.61
Publications
PubMed=21829347

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP26043
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.73|      18|      22|      17|      38|       1
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    7-   27 (27.03/ 6.64)	ANAAAASamyPTPPDAVQNPL
   32-   52 (28.71/16.56)	APAADAVtssPGPPSSVAAPV
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.86|      18|      26|     317|     342|       2
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  118-  135 (30.02/12.79)	DDNNPL........DLNMSAPDTTMT
  317-  342 (20.84/21.50)	LENSSLqaspdrieELSSDADDMSLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.35|      18|      32|     190|     210|       3
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  190-  210 (28.45/22.53)	GRLtsdNSKALSNK.....REPSPFD
  223-  245 (26.90/13.40)	GRL...NDQSLGSSstvtaRKGSVFD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.46|      16|      18|     510|     527|       4
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  506-  521 (31.94/14.49)	PLLGPPSRAQPRPVPP
  524-  539 (32.52/22.60)	PNAEPPKPNYLFQIPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     108.90|      40|     244|     143|     187|       5
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  143-  185 (62.26/47.95)	EPiSLQADiLPPsI..............DDP.PEETKLK.............TEAPIFTKPELRHARS.TLN
  390-  458 (46.63/20.11)	DP.SLALD.LPR.IarfevpevavakyfDDPePLLSQLSlqdddiitvaqilTEQAISGNLCLRDAQSaTFN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.02|      16|      18|      68|      83|       6
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   68-   83 (32.15/16.75)	EGDNWEPTDTKRDR.GD
   87-  103 (27.87/13.62)	EGDDNLFGDMGPDMfGD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.72|      11|     179|     462|     481|       7
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  462-  476 (13.49/24.79)	GSETRRQLaslsRTL
  489-  499 (21.23/ 7.09)	GDSTQCQF....REL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP26043 with Med13 domain of Kingdom Fungi
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