Description | Uncharacterized protein |
Sequence | MDIISQLQEQVNLIAHLAFNTVGTLQRDAPPNRLSPNYPEPPAHATEDGSNFSEQPKLMSTTLVKAAKQFDALVAALPISESGEEAQLKRISELQAENDAIGLELQKQLEAAEKELNQVQELFRQASDNCLNLKKPDDS |
Length | 139 |
Position | Middle |
Organism | Glycine max (Soybean) (Glycine hispida) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Glycine> Glycine subgen. Soja. |
Aromaticity | 0.04 |
Grand average of hydropathy | -0.545 |
Instability index | 55.67 |
Isoelectric point | 4.56 |
Molecular weight | 15307.93 |
Publications | PubMed=20075913 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU366036 |
GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central polar nucleus GO:0043078 IEA:EnsemblPlants |
GO - Biological Function | transcription coregulator activity GO:0003712 IBA:GO_Central |
GO - Biological Process | defense response to fungus GO:0050832 IEA:EnsemblPlants regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central |
Binary Interactions |
Repeats | >MDP25991 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 81.04| 27| 27| 77| 103| 1 --------------------------------------------------------------------------- 77- 103 (42.59/30.42) LPISESGEEAQLKRISEL..QAENDAIGL 105- 133 (38.45/26.77) LQKQLEAAEKELNQVQELfrQASDNCLNL --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) EEAQLKRISELQAENDAIGLELQKQL 2) FSEQPKLMSTTLVKAAKQFDALVAALPIS | 84 52 | 109 80 |
© 2021 Shailesh Lab
Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab