<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25956
Description |
Mediator of RNA polymerase II transcription subunit 7 |
Sequence | MAMATSSSYPPPPPFYRLYKNFEQDASSAPEPPPPIDGPFKALGVDYTGDVVIPSLESHNVRQLYPKGPNIDFKKELRTLNRELQLHILELADILVERPSQYARRVEDITLIFKNLHHLLNSLRPHQARATLIHMLESQIQHRKQAIEDIKQRREEAQKLLGESLHILDGSQTN |
Length | 174 |
Position | Middle |
Organism | Sorghum bicolor (Sorghum) (Sorghum vulgare) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Andropogonodae> Andropogoneae> Sorghinae> Sorghum.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.586 |
Instability index | 69.32 |
Isoelectric point | 6.71 |
Molecular weight | 19945.52 |
Publications | PubMed=19189423
PubMed=29161754
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery.
ECO:0000256 RuleBase:RU364060
|
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP25956
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 58.34| 14| 19| 7| 20| 1
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7- 20 (31.80/16.64) SSYP.PPPPFYRLYK
27- 41 (26.54/12.89) SSAPePPPPIDGPFK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 105.99| 34| 77| 53| 90| 3
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53- 90 (53.35/43.50) IPSLEShnvrQLYPKGPNIDFKKELRTLNREL...QLHILE
133- 169 (52.64/33.02) IHMLES....QIQHRKQAIEDIKQRREEAQKLlgeSLHILD
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