<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25947

Description Uncharacterized protein
SequenceMGKYSDGGKDSGEAGGAAGYPLVAVCIDKDKNSQNALKYATETLAHKGQTIVLVHVNTKGTSGGVEDAAGYKQPTDPQMKDLFLPFRCFCTRKDIQCKDVVLDDHDVAKSVVEFAAHAAIEKLVVGATTRSSFVRFKAEICSSISKAAPDFCTVYVVSKGGKVTSVRQAVRQAPAVSPLRTIIQGPKPEPVHAQKWTPPPPSSGTPMLPENHIMSPFARTTGHNAGSARKAFPDFSLPESSDISFIGTAPRRSIERYPPRLSNGSDGLDHQQHSFEASRTPSRWGDSFGNESTSHSQTSTSSWCSQPSDEMEAEMKRLRLELKQTMDMYSTACKEALSAKQKAMELQRWKMDEEQRSQETRLTEESAMALIEQEKAKARAAIEAAEAAQRLADFEAQKRISAEMKALKEAEERLRSMAAGARESVVRYRKYTIEEIEIGTDNFNEARKVGEGGYGPVYKGHLDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFHRGGGGQVLPWQHRFRIAAEIATGLLFLHQAKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADNVTQCHMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGVTLLQIVTARPPMGLTHHVGRALERGTFADLLDPAVDDWPMEEAHRFAEISLRCCELRRKDRPDLATVVLPELNRLRALGEDNMDSCMAMSMSCRGGGGGLHSSSTFHSHSNPYSQPRHDAASDPTRPHHVSNACQSALPTRRPSYN
Length781
PositionTail
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Sorghinae> Sorghum.
Aromaticity0.06
Grand average of hydropathy-0.470
Instability index52.44
Isoelectric point6.97
Molecular weight85781.11
Publications
PubMed=19189423
PubMed=29161754

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP25947
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      68.68|      20|      22|     143|     162|       1
---------------------------------------------------------------------------
  143-  159 (22.67/10.69)	...............SISKA...APDFCTVYVVSK
  160-  184 (20.34/ 8.84)	GGK..........vtSVRQAvrqAPAVSPLRTIIQ
  185-  216 (25.67/13.07)	GPKpepvhaqkwtppPPSSG...TPMLPENHIMSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      74.50|      13|      23|     270|     282|       2
---------------------------------------------------------------------------
  223-  239 (15.25/ 6.14)	HNagsaRKAFPD.FSLPE
  249-  259 (18.43/ 9.02)	AP....RRSIE...RYPP
  270-  282 (23.76/13.85)	HQ....QHSFEA.SRTPS
  295-  308 (17.06/ 7.77)	HS....QTSTSSwCSQPS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      78.08|      22|      22|     380|     401|       3
---------------------------------------------------------------------------
  365-  384 (23.75/13.57)	.ESAMALIEQE.KAKARAAIEA
  385-  406 (34.53/23.05)	AEAAQRLADFEAQKRISAEMKA
  408-  424 (19.79/10.08)	KEAEERLRSMAAGARES.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     137.99|      43|     198|     486|     532|       5
---------------------------------------------------------------------------
  486-  532 (73.28/60.48)	EVEVLSC.IR...HPNMVLLLgaCPEYGCLvyEYMANGSLDDCLF....HRGGGG
  683-  733 (64.71/40.98)	EISLRCCeLRrkdRPDLATVV..LPELNRL..RALGEDNMDSCMAmsmsCRGGGG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.38|      15|      23|     309|     327|       9
---------------------------------------------------------------------------
  323-  344 (15.75/13.02)	KQTMDmystackEALSAKQKAM
  348-  362 (25.63/ 7.54)	RWKMD.......EEQRSQETRL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP25947 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GGLHSSSTFHSHSNPYSQPRHDAASDPTRPHHVSNACQSALPTRRPSYN
2) IGTAPRRSIERYPPRLSNGSDGLDHQQHSFEASRTPSRWGDSFGNESTSHSQTSTSSWCSQPSDEMEAEMKRLRLE
3) PKPEPVHAQKWTPPPPSSGTPMLPENHIMSPFARTTGHNAGSARKAFP
733
246
186
781
321
233










Molecular Recognition Features






MoRF SequenceStartStop




NANANA