<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25808

Description Uncharacterized protein
SequenceMHHYTLVKFISGATYESVSTAYELFKLMIINYKDLSSRETDLYQFNEVWNFINASMEKVFDSEKQQDPDPKMQFNKSLYEKETADSPLKVSMQNQRLNEVYSIEQFKNDLSNLMSVTESLLSAEELDDIVNEIQPGNDHFTTDFDNAVKHEAQIIILLDEWYGRLYDLAENQELALFKLVESTRRTMKISTPRSFETQVQTFIKQKMENNSSVETLYILLQKLVTFELFSLFDLVSMLKNLSMESNCNIKEIGPLITDLTLGDAPQKNLPCYQYLIIKEIQHEYQMRHVKDIISYTLDQHSPLSIFKQREIRTKHETKIISIVRDGLLFHQRWTMMFLADRLSEDQLLPLFNQMLTFSMSSLNDTDNLARSTNEFTLAVVQALLSFMARAQSDGNNFGKIIAPAIKLFHFSFGPSNSFFGEMFNCLNWSTKLQIFHYMEHVFLTQTAFYSDWGVEDIMAQENVHPVSLWKNIEGDELIPAFKDYFKKFSLSSAEKIATTIEEFRRLEQFLLKLLNVLDNDDVAQQDDSYVYDVVSIFLKLLIIRKATLTMVVVEHDATHFTFLKNLVSMLNTRYFMNGHEKLKILLYDLLLLMKSSLTEQLRLGTNESIIGNTQMGPSQSISSSGSNGEDRKGQGENPDAPDLAADALTRVSDILNLPEPASENPFGELAIEEDDSAFGLDEEELDYGSDVGYINNSGLVLTSTRSDSIGFSTAFGVLQQDAPIQRFNIKGMNLIEDTSTELNDGCINLSLFDAYTIRENPP
Length762
PositionKinase
OrganismClavispora lusitaniae (strain ATCC 42720) (Yeast) (Candida lusitaniae)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Metschnikowiaceae> Clavispora.
Aromaticity0.10
Grand average of hydropathy-0.251
Instability index38.13
Isoelectric point4.71
Molecular weight87272.89
Publications
PubMed=19465905

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP25808
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     457.06|     139|     149|     234|     380|       1
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  149-  231 (49.96/22.70)	.....................................................................................KHEAQIIILLDEwyGRLYdlaeNQelalfklvestRRTMKISTPRSFETQVQTFIKQKME.NNSSVETLYILLQKLVTFELFSL
  234-  380 (222.47/154.48)	LVSMLKNLSMESNCNIKEIGPLITDLTLGDAPQKN.....LPCYQYLIIKEIQHeYqMRHVkdiisyTLDQHSPLSIFKQREIRTKHETKIISIVRD..GLLF....HQ...........RWTMMFLADRLSEDQLLPLFNQMLTFSMSSLNDTDNLARSTNEFTLAVV
  383-  503 (184.63/111.14)	LLSFMARAQSDGNNFGKIIAPAIKLFHFSFGPSNSffgemFNCLNWSTKLQIFH.Y.MEHV......FLTQTAFYSDWGVEDIMAQENVHPVS.................................LWKNIEGDELIPAFKDY..FKKFSLSSAEKIATTIEEF.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.29|      28|      31|      85|     112|       2
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   85-  112 (45.95/28.64)	DSPLKVSMQNQRLNEVY.SIEQFKNDLSN
  118-  146 (38.35/22.69)	ESLLSAEELDDIVNEIQpGNDHFTTDFDN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP25808 with Med12 domain of Kingdom Fungi
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