<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25743

Description Uncharacterized protein
SequenceMTKEIQKGLNKLGGVEKKEESKSKKQSKSDTPVDLRGLKEKVQQLTYFDQHSVTHTCTHHILELVSGFLAGTNSHLPPIEHITFVLDLMELALNIHGLLDFTIQLLTELSQVEAELMLKSSSLAGSYTTSLCLCIVAVLRRYHACLLVDQQRSVTVFEGLCSVVKHVGNPSDCSSPERCILAYLYDLYTSSSHLKQRFGDVFSSACSRVKNTVFVSIQPSASNLLWNPDFMLDIVENPRINVLQQPRERLSLAKKLNEHPANRYSFVCNVLLIICNGQDINRINEISVLCSELTAFCNSLSSEWLGVLKALCCSSNHGCGFNDLLCSVDVGDLSIHDSLAVFTAILIARHCFSLEDFVKHVAIPALMAACPSAGGDQDAEPGARLTCHLLLHLFRRSSSEPVDAKKPGHRNIFHIKSSCDRHLLYAAHNSMSVGAVLAVLKAVLMLANYKVMPATPREVQVTIQTPQEWVQERCLHDPEGLCTAELLLDPMLSQQQEWVQERCLHDPEGLCTAELLLDPMLSQQQVWSGYRSAVYTTLRDCVQQNYCWIPCCHNNRYSYYYIALSAGVGTGVLSNCTAELLLNPMLSQQQAQNLLQLICYPEGMPGLLDDDDSGDRQKQIISQILQRLDKWWLRVSWLELQVMIKQCPPSEMNSLLDKIAHCTIEVFQRQTTQGDKGETKEDVEWHNSWLVAPLISKMPSSVQGRVLRAAGQVLESGNSCFARSKADRERQAQKTLSLLNQQPFLSVVLTCLKGQDEQREGLLSSLQTQLTQLLQAKEKDEHFFEDVKNKKMLEESLQLRLSLLGGMFDTVQRSTQLTTDWALLLLQLISSGTVDPQNNSALFTTVLDMLCVLLSSTMASESKDSSPSSGDERRIYINLIKKLKKELGDKHSPGVDKVRQLLPLSKQFTDVITCEPMGSLIDTKGNKIADFDSIDKKQGLQVASKQKVSGWDLLEGHKNPGPLSWSWFGAVRMERKPLLYEEQHRLLLHHTHTRKKPMEYYLEPPPLPPVEEEETAAPAQDQGKQTPDPIKQPEPKPAQTPKKTKAAAARKRRQSKAVNQSNRDQSHTSTLMNQIPPYGEQQHMMQPNYYLQPNPHPSYGYQQPLPPAPTTRYVCLTTISNPHPSHGYQQPLPPGGPRMEQRPMGMINPKAALSSMLRARQPGNHPVNNQQLQLQRWRNQHLRQRLQAPAQQNLQPGGQTAASQPPMYSPYDKQPSLHHLPQQQAYTGYSTQHQQMSQGVMPAPHPEPAGTSMISPPYSSSYSTSQSAGMMGNMPVSQQNQYMAQGTGPSMTQPTHQAMSMGQPGSGTKDSTLTEEKSDSSPLSPAYTGYSTQHQQMSQGVMPAPHPEPAGTSMISPPYSSSYSTSQSAGMMGNMPVSQQNQYMAQGTGPSMTQPTHQAMSMGQPGRNTMGGGAPMMSTDPMQQANLYPAQQQQQQVQQQAQQQAQQQAQQQARQRQLQQQLQQAQQQQQQQMQQSLMQQSVMGVQRTAQQQQTAALVQHLQRQLSGNQTAPVPPPPPQQPARQHQQFPSQGHQY
Length1535
PositionKinase
OrganismBranchiostoma floridae (Florida lancelet) (Amphioxus)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Cephalochordata> Leptocardii> Amphioxiformes> Branchiostomidae> Branchiostoma.
Aromaticity0.06
Grand average of hydropathy-0.522
Instability index60.28
Isoelectric point7.68
Molecular weight171120.78
Publications
PubMed=18563158

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP25743
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     241.82|      24|      28|    1254|    1277|       1
---------------------------------------------------------------------------
 1085- 1108 (32.55/11.02)	MQPNY.YLQPNPHPSYG..Y.QQPLPPA
 1119- 1145 (25.84/ 7.08)	ISNPHpSHGYQQPLPPGgpR.MEQRPMG
 1227- 1244 (24.22/ 6.13)	.......TGYSTQHQQM..S.QGVMPAP
 1254- 1277 (46.72/19.34)	ISPPY.SSSYSTSQSAG..M.MGNMPVS
 1283- 1306 (26.55/ 7.49)	MAQGT.GPSMTQPTHQA..MsMGQ.PGS
 1323- 1345 (39.23/14.94)	LSPAY..TGYSTQHQQM..S.QGVMPAP
 1355- 1378 (46.72/19.34)	ISPPY.SSSYSTSQSAG..M.MGNMPVS
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     173.89|      27|      27|     469|     495|       2
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  469-  495 (63.18/35.33)	WVQERCLHDPEGLCTAELLLDPMLSQQ
  498-  524 (63.18/35.33)	WVQERCLHDPEGLCTAELLLDPMLSQQ
  576-  589 (21.89/ 7.50)	.............CTAELLLNPMLSQQ
  594-  610 (25.64/10.02)	LLQLICY..PEGM..PGLLDD......
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     182.83|      22|      23|    1431|    1452|       3
---------------------------------------------------------------------------
 1170- 1192 (27.38/ 7.74)	QQLQLQRWRNQHLRQRLQAP.aQQ
 1193- 1212 (28.42/ 8.36)	NLQPGGQTAASQPP..MYSP..YD
 1388- 1407 (27.30/ 7.69)	TGPSMTQ..PTHQAMSMGQP..GR
 1433- 1456 (34.41/11.98)	QQQQVQQQAQQQAQQQAQQQarQR
 1457- 1480 (33.28/11.30)	QLQQQLQQAQQQQQQQMQQSlmQQ
 1509- 1532 (32.05/10.55)	QTAPVPPPPPQQPARQHQQFpsQG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     184.44|      51|     192|      98|     175|       5
---------------------------------------------------------------------------
  113-  163 (87.29/70.05)	EAELMLKSSSLAGSY.........TTSLCLCIVAVLRRYHACLLVDQQRS....VTVFEGLCSV
  179-  208 (39.20/45.34)	..............................CILAYLYDLYTSSSHLKQRF....GDVFSSACSR
  794-  851 (57.95/24.21)	EESLQLRLSLLGGMFdtvqrstqlTTDWALLLL....QLISSGTVDPQNNsalfTTVLDMLC..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     187.07|      59|     347|     285|     390|       6
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  329-  390 (95.92/146.94)	DVG....DLSIHDSLAVftAILIARHCFSLEDFVKHVAIPALMA..ACPsAGGDQDAEPGARLTCHLL
  675-  739 (91.15/46.50)	DKGetkeDVEWHNSWLV..APLISKMPSSVQGRVLRAAGQVLESgnSCF.ARSKADRERQAQKTLSLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.20|      17|      19|    1006|    1024|       7
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 1006- 1024 (22.81/20.30)	PlPPVEEEEtAAPAQDQGK
 1027- 1043 (33.39/19.12)	P.DPIKQPE.PKPAQTPKK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.44|      18|      19|     259|     276|       8
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  259-  276 (34.79/31.07)	HPANR...YSFVCNVLLIICN
  278-  298 (27.66/22.81)	QDINRineISVLCSELTAFCN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.65|      17|      24|     866|     883|      10
---------------------------------------------------------------------------
  866-  883 (24.24/19.51)	SPSSgDERRIYINLIKKL
  892-  908 (29.42/18.24)	SPGV.DKVRQLLPLSKQF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.04|      20|     312|     612|     633|      11
---------------------------------------------------------------------------
  612-  633 (33.48/27.00)	DSGDRQK..QIISQilQRLDKWWL
  932-  953 (30.56/17.96)	DSIDKKQglQVASK..QKVSGWDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.16|      12|      28|     527|     542|      15
---------------------------------------------------------------------------
  527-  542 (20.47/21.53)	W.........SGYrsavYTTLRDCV
  548-  568 (16.69/ 7.55)	WipcchnnrySYY....YIALSAGV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP25743 with Med12 domain of Kingdom Metazoa
Unable to open file!