<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25707

Description Uncharacterized protein
SequenceMASPVSPRCKDQKEAKDMDEKHETVEEKEARAREDIKRRLENRERAFIAASRRGDRTMEASFESALRASEVHKERTGKGLRITMEAVEREEMYDELDDEHGRKRRCHIDSLQLRSQSLDVHLHPYMVANFGKANPVSNFTPLNGHLHSPYQTGSIAAQGVYDPATYHFTGVPGVERMFNNPFSPAAAAAASHARSNSLPVVQNTSVYERQRMTSFDDQHHRMNRRVASDPALALSHLQQTALPMRPESHPKNSFAAYPLHRNPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQWQHLEQAQQQASNSMRPHSNTQQQYHAVLQASPNIRQEASNLHKLSPNMRRQSYQHIQQPRPRHLDTHYRANRVIRMNSLDCTPYSQSSPVKSPAEGLSTPVAYPTSATAYAWGGNNHCLVNSSTTNSNAICPTANAHDLSNCIPSSEVQEMENETSDAPIHRTPIQAHLSTPLFKTPANETSPVSRGTSAGSMTTSGSSLTDPSIPSPGDNRAFQDQAAIAVGPGDLVSGSTNNSGDMLTEEIGGGSETSSFFQDAFSDVNGLEINTTGSQECSDENNFLRYEFSEPFGVPAL
Length592
PositionTail
OrganismParacoccidioides lutzii (strain ATCC MYA-826 / Pb01) (Paracoccidioides brasiliensis)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Onygenales> Onygenales incertae sedis> Paracoccidioides.
Aromaticity0.06
Grand average of hydropathy-0.965
Instability index66.67
Isoelectric point6.23
Molecular weight66092.66
Publications
PubMed=22046142

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP25707
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      75.42|      14|      15|     264|     278|       1
---------------------------------------------------------------------------
  264-  276 (23.75/ 8.56)	...QQQQQQQQQQQQQ
  278-  293 (25.23/11.11)	QqqQQQQQQQQQQQQQ
  294-  307 (26.44/ 7.67)	Q..QQQQWQHLEQAQQ
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.46|      21|      25|     448|     470|       2
---------------------------------------------------------------------------
  448-  470 (33.13/22.10)	QEMENETSdaPIHRTPIQAHLST
  474-  494 (36.33/18.57)	KTPANETS..PVSRGTSAGSMTT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.51|      24|      26|     119|     144|       3
---------------------------------------------------------------------------
  121-  144 (47.98/32.14)	HLH.PYM...VANFGKANPVS.NFTPLNG
  145-  173 (34.52/15.70)	HLHsPYQtgsIAAQGVYDPATyHFTGVPG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      75.93|      24|      26|     308|     331|       4
---------------------------------------------------------------------------
  324-  352 (25.77/ 9.48)	HAVLQASP...nirqEASNLHKLSPNMRRQsY
  353-  383 (28.92/11.49)	QHIQQPRPrhldthyRANRVIRMNSLDCTP.Y
  416-  437 (21.23/ 6.59)	HCLVNSS.......tTNSNAICPTANAHD...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.10|      20|      37|     495|     530|       5
---------------------------------------------------------------------------
  495-  515 (32.44/38.63)	SGSSLTDpSIPSPGDNRAF.QD
  534-  554 (31.66/ 8.12)	SGDMLTE.EIGGGSETSSFfQD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     184.64|      58|     117|      55|     113|       6
---------------------------------------------------------------------------
   55-  113 (93.92/61.64)	DRTMEASFESALRASEVHKERTGKGLRITMEAVEREEMyDELDDEHGR.KRRCHID.SLQL
  175-  234 (90.72/54.72)	ERMFNNPFSPAAAAAASHARSNSLPVVQNTSVYERQRM.TSFDDQHHRmNRRVASDpALAL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP25707 with Med2 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DLSNCIPSSEVQEMENETSDAPIHRTPIQAHLSTPLFKTPANETSPVSRGTSAGSMTTSGSSLTDPSIPSPGDNRAFQDQAAIAVGPGDLVSGSTNNSGDMLTEEIGGGSETSSFFQDAFS
2) MASPVSPRCKDQKEAKDMDEKHETVEEKEARAREDIKR
3) MEASFESALRASEVHKERTGKGLRITMEAVEREEMYDELDDEHG
4) MFNNPFSPAAAAAASHARSNSLPVVQNTSVYERQRMTSFDDQHHRMNRRVASDPALALSHLQQTALPMRPESHPKNSFAAYPLHRNPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQWQHLEQAQQQASNSMRPHSNTQQQYHAVLQASPNIRQEASNLHKLSPNMRRQSYQHIQQPRPRHLDTHYRANRVIRMNSLDCTPYSQSSPVKSPAEGLSTPVAYPTS
437
1
58
177
557
38
101
405










Molecular Recognition Features






MoRF SequenceStartStop




1) FAAYPLHR
2) NFLRYEFS
254
577
261
584