<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25695
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPLIMEDSIDVDDLFGGSNFPGARAGSHSAYHQRATPKTRRATAFGMLKIAWSKLGAIAYVSQDGQRVHLRYLYCRPDDGKWTLSDEAPINQITDPHGVHAIVHLLWNEAGSELAIVDSSGRISIVTILTTLNTINFARQASIDPDDDWAQPVGLMWLSVNRPLFGFHKATRTDDRWSYPAHRRRPLGPLHPVNKSGLVLVTKSGHIKIIYQNPDMRWAEISTELTSIGYSDGILTHAAMAPAEGSGISIATHSECREICFYRVQVRWDPPEWDQTLKQGGQPNPFPTPSFQILRTKTDTLSDVFHPPVHDTENLSDFSAANGAVYRVTHLEIITAPQVLPGAQSASGPCVLALASIPVHSQLGQPHPSVPSSVLIRWQLDTMAQTLHPSFDDVASNKTAANPKSKIAFRRQEDIYFDRFVVSIDHMEAGGVVVITYDDSSISFFDAKTMRPVNENEDVNVVTSMPNAGFTFPIDASGLHIAFSPSGCLAVVLDGEWQMHLRYMEHSYGMEDGMYNNDKFTCAIAALALGYVRACGSDTSADDILSVIVRQLNPDAQMSFVTEVYSILFMSVDFTEQDKLVNNQSIQKGLSMQAVLGFRSRFQPRALTSAVPWIILNIRQIMLLILTFSHYLKSGRESTPCEPEVLRMVLGNVKWILDLAKYLVDNLFEIADTIPTDRSSFSLSSKTYESLSLVLILSSVPRSFLRHIFRYLNRFPLTFKAANNLSGESYQIFASISDTIEQASLKPDVCEKMLAHIDSLVARSYQAAGFSNAERNAPERELLITCSIPPVLQPVIMSILTETMPLVVRPEVDRMALALYDYSWLGIGDDKRTELFKRTHDVDILKRNVGRLLDGSVAKRRCVRCCEISEDVSLPRSVGMYRWIGKIGVLRMCVCGGLFAMENVERLNQVPFPVYR |
Length | 916 |
Position | Tail |
Organism | Paracoccidioides lutzii (strain ATCC MYA-826 / Pb01) (Paracoccidioides brasiliensis) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Eurotiomycetidae> Onygenales> Onygenales incertae sedis> Paracoccidioides.
|
Aromaticity | 0.09 |
Grand average of hydropathy | -0.083 |
Instability index | 47.44 |
Isoelectric point | 6.13 |
Molecular weight | 102122.66 |
Publications | PubMed=22046142
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP25695
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 127.26| 24| 66| 77| 100| 1
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77- 100 (45.23/21.49) PDDGKWT........LSDEAPIN....Q.....ITDP.HGVH
145- 168 (28.00/11.02) PDD.DWA............QPVGlmwlS.....VNRPlFGFH
172- 208 (27.41/10.67) RTDDRWSypahrrrpLGPLHPVN....KsglvlVTKS.GHIK
214- 234 (26.62/10.19) P.DMRWA.......eISTE..LT....S.....IGYS.DGI.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.09| 25| 430| 48| 73| 3
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48- 73 (42.52/33.21) LKIAWSKLGAIAYVsQDGQ.RVHLRYL
479- 504 (44.57/29.87) LHIAFSPSGCLAVV.LDGEwQMHLRYM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 227.83| 79| 171| 563| 656| 4
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563- 656 (117.99/111.04) EVYSIlFMSV.DFTEQdKLVNNQSIQKGL.........SMQAVlGFRS..RFQP.RAL..TSAVPWIilnIRQIMLLILTfshylksgrESTP..CEPEVLRMVLG..NVKWI
728- 825 (109.84/68.18) ESYQI.FASIsDTIEQ.ASLKPDVCEKMLahidslvarSYQAA.GFSNaeRNAPeRELliTCSIPPV...LQPVIMSILT.........ETMPlvVRPEVDRMALAlyDYSWL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.06| 11| 80| 279| 290| 7
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279- 290 (20.42/13.79) QGGQPNPfPTPS
362- 372 (23.64/11.12) QLGQPHP.SVPS
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