<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25673
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPLIMEDSIDVDDLFGDPTSLELGLEATAPTIKGLPQRLDELRLSGCCQKVAWSKLGAIAYVSQDGQRVHLRYLYCRPDDGKWTLSDEAPINQITDPHGIHTIAHLLWNEAGSELAIVDSSGRISIVTILTTLNTINFARQASIDPDDDWAQPVGLMWLSVNRPLFGFHKATRTDDRWSYPAHRRRPLGPLHPVNKSGLVLVTKSGHIKIIYQNPDMRWAEISAELTSIGYSDGILTHAAMAPAEGSGISIATHSECREICFYRVQVKWDPPEWDQTLKQGGQPNPFPTPSFQILRTKTDTLSDVFHPPVHDMENLSDFSAANGAVYRVTHLEIITAPQVLPGAQSASGPCVLALASIPVHGQLGQPHPSVPSSVLIRWQLDTMAQTLHPSFDDVASNKIAANPKSKIAFRRQEDIYFDRFVVSIDHMEAGGVVIITYDDSSISFFDAKTMRPVNENEDVNVVTSMPNAGFTFPIDASGLHIAFSPSGCLAVVLDGEWQMHLRYMEHSYGMEDGMYNNDKFTCAIAALALGYVRACGSDTSADDILSVIIRQLNPDAQMSFVTEVYSILFMSVDFTEQDKLVNNQSIQKGLSMQAVLGFRSRFQPRALTSAVPWIILNIRQIMLLILTFSHYLKSGRESTPCEPEVLRMVLGNVKWILDLAKYLVDNLFEIADTIPTDRSSFSLSSKTYESLSLVLILSSVPRSFLRHIFRYLNRFPLTFKAANNLSGESYQIFASISDAIEQASLKPDVCEKMLAHIDSLVARSYQAAGFSNAERNAPERELLITCSIPSVLQPVIMSILTETMPLVVRPEVDRMALALYDYSWLGIGDDKRTELFKRTHDVDILKRNVGRLLDASVAKRRCVRCCEISEDVSLPRSVGMYRWIGKIGVLRMCVCGGLFAMENVERLNQVPFPVYR |
Length | 917 |
Position | Tail |
Organism | Paracoccidioides brasiliensis (strain Pb18) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Eurotiomycetidae> Onygenales> Onygenales incertae sedis> Paracoccidioides.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.051 |
Instability index | 45.89 |
Isoelectric point | 5.71 |
Molecular weight | 102203.97 |
Publications | PubMed=22046142
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP25673
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 226.59| 79| 171| 564| 657| 2
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564- 657 (117.95/129.98) EVYSIlFMSV.DFTEQdKLVNNQSIQKGL.........SMQAVlGFRS..RFQP.RAL..TSAVPWIilnIRQIMLLILTfshylksgrESTP..CEPEVLRMVLG..NVKWI
729- 826 (108.64/79.02) ESYQI.FASIsDAIEQ.ASLKPDVCEKMLahidslvarSYQAA.GFSNaeRNAPeRELliTCSIPSV...LQPVIMSILT.........ETMPlvVRPEVDRMALAlyDYSWL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 85.58| 26| 64| 385| 410| 4
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385- 410 (42.71/30.09) AQTLHPSFDDVASNKIAANPKSKIAF
448- 473 (42.87/30.24) AKTMRPVNENEDVNVVTSMPNAGFTF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 69.08| 20| 170| 179| 200| 5
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179- 200 (34.31/25.76) SYPAHRRrpLGPLHP.VNKSGLV
357- 377 (34.77/19.08) SIPVHGQ..LGQPHPsVPSSVLI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 37.15| 10| 428| 65| 74| 9
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65- 74 (20.05/11.72) DGQ.RVHLRYL
495- 505 (17.09/ 8.99) DGEwQMHLRYM
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