Description | Uncharacterized protein |
Sequence | MDIISQLQEQVDTIASLAFNTIGTLQRDAPPVRLSPNYPEPPASNPAEDIADQPKLMSAALVKAAKQFDALVAALPLAEGGEEAQLKRIAELQAENDAVGQELQRQLEAAEKELKQVQELFSQATDNCLNLKKPD |
Length | 135 |
Position | Middle |
Organism | Ricinus communis (Castor bean) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Acalyphoideae> Acalypheae> Ricinus. |
Aromaticity | 0.03 |
Grand average of hydropathy | -0.396 |
Instability index | 52.89 |
Isoelectric point | 4.42 |
Molecular weight | 14647.34 |
Publications | PubMed=20729833 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU366036 |
GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central |
GO - Biological Function | transcription coregulator activity GO:0003712 IBA:GO_Central |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central |
Binary Interactions |
Repeats | >MDP25585 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 97.88| 26| 27| 69| 94| 1 --------------------------------------------------------------------------- 43- 64 (25.24/ 9.00) ....ASNPAEDIADQPKLMSAALV..KA 69- 94 (39.12/16.79) DALVAALPLAEGGEEAQLKRIAEL..QA 97- 124 (33.51/13.65) DAVGQELQRQLEAAEKELKQVQELfsQA --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) AEDIADQPKLMSAALVKAAKQFDALVAALP 2) EAQLKRIAELQAENDA 3) PVRLSPNYPEP | 47 83 31 | 76 98 41 |
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