<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25579

Description "ATP binding protein, putative"
SequenceMWMTRSQIDKSSSQGSGNGLVAVAIDKDKSSQSALKWAIDHILHKGQTVLLIHVKLKSISMSSAYSLSTPRMNQIADANGESMLVCRDPDSLTKELFLPFRCFCTRKDIQCKDVVLEETDIAKALVEYATRTAIETLVVGASNKSGLFRFKATDTPGSVLKGAPDFCTVYVISKGKIQSTRSASRPPPSLSPMHTQLVNQNGVKPLPPPTEILLPQIQNPNPTTAFRRVVEKPPLEQPRRSNEESESFRSPFTRRGLNGKSYGELSIPDTDISFVSSGRPSIDRMFPAFYDVLEMGARNQRLSNVSDIDSIQSFESMQFGRRSIDINIGSPPEFSSMSYDSDRLSTASQPMDDVEAEMRRLKLELKQTMEMYSTACKEALTAKEKTRELQLWKLEEEQRLEEARLAEETALAIAEKEKAKSKAAIEAAEAAQRIAELEAQKRVSAEMKALRESQEKKKALDALAHSDIRYRKYSIEEIEAATEFFSESRKIGEGGYGPVYKCYLDHTSVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRLFRRGNTPPLSWQLRFRIAAEIGTSLLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMFLQILTAKPPMGLTHHVERSLEKDTFEEMLDPAVPDWPVEEAKCFARLALKCSELRRKDRPDLGNVVLPELNRLRSLAEENMHLALPIPSPNHSPRPSQVSVQLTDSNISYVSSRRSSRILESQS
Length802
PositionTail
OrganismRicinus communis (Castor bean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Acalyphoideae> Acalypheae> Ricinus.
Aromaticity0.06
Grand average of hydropathy-0.418
Instability index57.10
Isoelectric point7.19
Molecular weight89809.53
Publications
PubMed=20729833

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
non-membrane spanning protein tyrosine kinase activity	GO:0004715	IEA:UniProtKB-EC

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP25579
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      68.67|      18|      18|     403|     420|       1
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  403-  420 (28.40/19.55)	ARL.AEETALAIAEKEKAK
  423-  441 (23.12/14.57)	AAIeAAEAAQRIAELEAQK
  445-  458 (17.15/ 8.94)	....AEMKALR.ESQEKKK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     558.44|     186|     546|      43|     247|       2
---------------------------------------------------------------------------
   43-  247 (277.73/198.46)	LHKGQTVLLIHVKLKSISMssaySLSTPRMNQIADAnGESMLVcrDP...DSLTK.ELFLPFRCFC.TRKDIQCKDVVLEETDIAKALVEY.ATRTAIETLvvGASNKsgLFRFKATDTPGSVLKGA.PDF......CTVYVISkgKIQSTRSASRPP......PSLSPMHTqLVNQNGVKPLPPPTeillPQiQNPNPTTAFRRVVEKP.PLEQPRRSNE..ESES
  595-  802 (280.71/154.93)	LHQTKPEPLVHRDLKPANI....LLDRNYVSKISDV.GLARLV..PPsvaDNVTQyRMTSTAGTFCyIDPEYQQTGMLGIKSDIYSLGIMFlQILTAKPPM..GLTHH..VERSLEKDTFEEMLDPAvPDWpveeakCFARLAL..KCSELRRKDRPDlgnvvlPELNRLRS.LAEENMHLALPIPS....PN.HSPRPSQVSVQLTDSNiSYVSSRRSSRilESQS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     114.17|      33|      39|     274|     312|       3
---------------------------------------------------------------------------
  274-  306 (59.66/40.64)	FVSS..GRPSIDRMFPAFYDVLEMGARNQRLSNVS
  314-  348 (54.51/25.67)	FESMqfGRRSIDINIGSPPEFSSMSYDSDRLSTAS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.89|      14|      28|     357|     370|       4
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  357-  370 (24.00/14.30)	EMRRLKLELKQTME
  388-  401 (23.89/14.20)	ELQLWKLEEEQRLE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP25579 with Med32 domain of Kingdom Viridiplantae
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