<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25552
Description |
Mediator of RNA polymerase II transcription subunit 7 |
Sequence | MATATFPPPPPFYRLYKDYIENPKSAPEPPPPIEGTYVCFASSYTTDDVLPSLEEQGVRQLYPKGPNVDFKKELRSLNRELQLHILELADVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRQREEAQKLLKEALGTLAGQ |
Length | 168 |
Position | Middle |
Organism | Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Malpighiales> Salicaceae> Saliceae> Populus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.554 |
Instability index | 70.42 |
Isoelectric point | 7.86 |
Molecular weight | 19361.00 |
Publications | PubMed=16973872
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery.
ECO:0000256 RuleBase:RU364060
|
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP25552
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.65| 10| 19| 7| 16| 1
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7- 16 (24.43/10.85) P.PPPPFYRLY
27- 37 (19.23/ 7.39) PePPPPIEGTY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 80.11| 27| 44| 74| 106| 2
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74- 106 (36.29/33.48) LRSLN.RELQLHILELAdvlVERPSQyarRVEDI
120- 147 (43.81/24.10) LRPHQaRATLIHILELQ...IQRRKQ...AVEDI
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