<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25535

Description Uncharacterized protein
SequenceMWLSKGQWSRKGGEGKGLVAVAVDKDKGSQNALKWTMENLLSKGQTVVLIHVFSKSSSSSSSSSFVTSHGAAGDYFSPGKQQLEKMAKDLFLAFRCYCTRKDVRCLDVALESTDIAKAITEYVAHAAIETLVLGTPSRSGFMRKFKADVPSTVSRGAPDFCTVYAVSKGKVSSMRNASRAAPFVSPLLDQIKNQQNEKSAGDDSHEALYKHSWSIKQRTASVNHHISVDENFRSPFGTGRYGHSVRSFADLMSETDISFVSSSRPSTDRMSSTTYDFMDSGLAPRLSTSSATSFASIHSGPKSIGPNSQQGFSSVSHDSGGTSFSGSTHSLDDMESEMRRLKLELKQTMEMYSEACREALTAKQKATELNRWRIEEERRLEEARFSEEAALSIIEQEKARCREAIEAAETAQRRAEIEAQRRVIIEKALKEAAQTKKSKGNLSYNDIRYRRYSIEEIEEATQYFSESKKIGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGRSQFQREVEVLSLIRHPNMVLLIGACPEYGILVYEHLAKGSLEDCLFKRGNTPALSWQIRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDNNYTSKIGDVGLARLVPATAENVTQYYMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQIITARPPMGLTHIVEQAIENGAFKEVLDPDVPDWPVEEALSYAKLALQCAELRRKDRPDLGTEVLPELNKLRDLAEEKTNYLYFAGSFGPYPNHSQASITPPLSQTSMTPTNLSQSSVNKEMTCDFVVENP
Length789
PositionTail
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Salicaceae> Saliceae> Populus.
Aromaticity0.08
Grand average of hydropathy-0.426
Instability index48.83
Isoelectric point6.83
Molecular weight87508.89
Publications
PubMed=16973872

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP25535
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     105.78|      33|      42|     356|     390|       1
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  356-  390 (52.08/37.98)	CREALTAKQKATElnRWRIEEERRLEEARFSEEAA
  401-  433 (53.70/33.10)	CREAIEAAETAQR..RAEIEAQRRVIIEKALKEAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      98.98|      32|      40|     262|     296|       3
---------------------------------------------------------------------------
  262-  295 (49.26/33.65)	SSRPSTDR.MSSTTYDfmDSGLAPRLSTSSATSFA
  303-  335 (49.72/26.79)	SIGPNSQQgFSSVSHD..SGGTSFSGSTHSLDDME
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     118.05|      35|     132|     522|     559|       4
---------------------------------------------------------------------------
  522-  559 (58.98/51.83)	LIGACPEYGIlvyEHLAKGSLEDCLFKRGNTPALS.WQI
  659-  694 (59.07/42.68)	IITARPPMGL...THIVEQAIENGAFKEVLDPDVPdWPV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP25535 with Med32 domain of Kingdom Viridiplantae
Unable to open file!