Description | Uncharacterized protein |
Sequence | MDIISQLQEQVNQIAGLTFNTFGTLQRDAPSARLSQNYPEPPPNPTEDAASFPEQPKQMSAALVKAAKQFDALVAALPLSEGGEEAQLKRIAELQAENDAVGQELQRQLEAAERELKLVQELFGQTTDNCLNLKKPD |
Length | 137 |
Position | Middle |
Organism | Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Salicaceae> Saliceae> Populus. |
Aromaticity | 0.04 |
Grand average of hydropathy | -0.556 |
Instability index | 57.75 |
Isoelectric point | 4.50 |
Molecular weight | 15016.63 |
Publications | PubMed=16973872 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU366036 |
GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central |
GO - Biological Function | transcription coregulator activity GO:0003712 IBA:GO_Central |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central |
Binary Interactions |
Repeats | >MDP25530 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 43.86| 14| 15| 77| 90| 1 --------------------------------------------------------------------------- 77- 90 (22.04/12.99) LPLSEGGEEAQLKR 94- 107 (21.82/12.80) LQAENDAVGQELQR --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) EAQLKRIAELQAEND 2) EDAASFPEQPKQMSAALVKAAKQFDALVAALPL 3) RLSQNYP | 85 47 33 | 99 79 39 |
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