Description | Mediator of RNA polymerase II transcription subunit 17 |
Sequence | MEQTGSLMLPLRPQTTKTSKKDNLPIRIAQINAQRGSFRNITEQSLQDEIKAQKERSKDKLEEEEEESKSQENVNEVDATERQELLYKRRAEIIQFAAQAHMETQFALDFISLLLSKHAPRQAETSISPYLKQNVPMGSLNIDVVKAPPKSQTALRDTQNVAHGWKIESFNASANRLLKAASRLESEVAAETKYWDQVLSIKDKGWKVCRLPRERQVLGVQYGFMEAAPTFRDRGLASLRRADDGTLVLDKGLVPSRARAVRVRVKKQGKITGSSSLSRFVAAAVSDDSVEKTILQSRDTLFEEELFHELTREARVLVSSGVTAHKDLIEFEYEAGEQILLELADVDDNPENDSEPSEGSTVNNNEAEAIAYALRILLSYAHRQNLRRRSQFPPPLTNQKRPTPQYQLLRPILSYMQHDAHVRSLQSFLQDVYQVLNSAGLASKYTTSKFSSLQFKSSADVSSSTSVETLLSQFMEPLESRFSGSMANPTSTYNIRIHTTMPDTSSRQMALGTDYELTIRLPNYPYTQPPSRIGLKHEVELLLLRLFTLDLITYISSISSHNAAAARGGDFTKNLLLWESPFPHHGELSGVTQDGKAVKQLAINLSRDSLGLCLKSRSQHDDKSDTNETAKKEDEAIDHDEDPFQSEFVVGPGGLQYTRPPQRLAGGEVVHVWRREDVKGAPKTLAEVIRDISSI |
Length | 695 |
Position | Head |
Organism | Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) (Penicillium stipitatum) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Trichocomaceae> Talaromyces> Talaromyces sect. Talaromyces. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.557 |
Instability index | 53.67 |
Isoelectric point | 6.30 |
Molecular weight | 78004.83 |
Publications | PubMed=25676766 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364140 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP25485 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 238.55| 76| 128| 455| 533| 1 --------------------------------------------------------------------------- 455- 533 (122.01/80.12) FKSSADVSSSTSVETLLSQFMEPLeSRFS.GSMANPTSTYNIRIHTTmpDTSSRQ.MALGTD.....YELTIRLPNYPYTQPPSRI 582- 664 (116.54/66.76) FPHHGELSGVTQDGKAVKQLAINL.SRDSlGLCLKSRSQHDDKSDTN..ETAKKEdEAIDHDedpfqSEFVVGPGGLQYTRPPQRL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 152.46| 56| 128| 5| 74| 2 --------------------------------------------------------------------------- 5- 74 (67.44/75.52) GSLMLplrpQTTKTSKKDNLPIRIAQiNAQRG....SFrNITEQSLqdeIKAqkersKDKLEEE.EEESKSQENV 138- 198 (85.02/51.82) GSLNI....DVVKAPPKSQTALRDTQ.NVAHGwkieSF.NASANRL...LKA.....ASRLESEvAAETKYWDQV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 87.58| 29| 34| 356| 387| 3 --------------------------------------------------------------------------- 356- 387 (43.21/36.21) PsegSTVNNNEAEAIAYA.LRILLSY.AHRQNLR 393- 423 (44.37/28.46) P...PPLTNQKRPTPQYQlLRPILSYmQHDAHVR --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 35.72| 10| 27| 547| 556| 7 --------------------------------------------------------------------------- 547- 556 (17.33/ 8.16) FTLDLITYIS 571- 580 (18.38/ 8.97) FTKNLLLWES --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) LMLPLR 2) LPIRIAQIN | 7 24 | 12 32 |
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