<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25476

Description "Cyclin-dependent protein kinase Ssn3, putative"
SequenceMFGKNYSFLNSLGGTYPRDSGRSGSGYTSKVHIRERYHIVGFISSGTYGRVYKALGKNGKKGEFAIKKFKPDKEGELIQYTGLSQSAIREMALCSELNHPNVVGLEEIILEDKCIFMVFEYTEHDLLQIIHHHTQQQRYAIPARMVRSILFQLLNGLLYLHTNWVLHRDLKPANILVTASGAIRIGDLGLARLFYKPLNSLFAGDKVVVTIWYRAPELLLGSRHYTPAVDMWAVGCIFAELLSLRPIFKGEEAKMDSKKTVPFQRNQMMKIVEILGFPRQETWPGLAAMPEFNQMQSMMQSMKMSSRGALHYNKPSGLDTWYQGCLKTGGYSASNSVGTPGADGFDLLSRLLEYDPAKRITAEEALEHPYFTNGGPISANCFEGCETTYPPRRVSQEGNDIRTGSLPGTKRSGLPDDSLMGRVAKRLKE
Length429
PositionKinase
OrganismTalaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) (Penicillium stipitatum)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Trichocomaceae> Talaromyces> Talaromyces sect. Talaromyces.
Aromaticity0.10
Grand average of hydropathy-0.310
Instability index37.18
Isoelectric point9.14
Molecular weight48107.81
Publications
PubMed=25676766

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
RNA polymerase II CTD heptapeptide repeat kinase activity	GO:0008353	IEA:UniProtKB-EC

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP25476
No repeats found




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP25476 with CDK8 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) TYPPRRVSQEGNDIRTGSLPGTKRSGLPDDSLMGRVAKR
388
426










Molecular Recognition Features






MoRF SequenceStartStop




1) SLMGRVAKRLKE
418
429