<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25291
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MTVSSKEKHPSEEANDPIITSRSIESGPKMSNTISWSKNGFIAYAAPELNPKHNLNLTYLENVDGKSWQLAKHQGINVRPSAESNQTPELRLVSWSNLSTDLAVADIHGNFYVLLAGVGLLENKDANGSTSKNNGSSVPSTTSSPSYELTSYNHMEMIYRDIIDPQPTGRMISMSQIVSFKWLNIFKPQIINKPAVLTKVDNNSSSSPPFAYTYGVGQHHPHGTCHPISTKQACIALRQNGECILYFQGEHKVEYHKISIKLQFSSNAVIITKSSIGFKNDKDVIISAFDAVSNSIKTFLISIDWGFLVESAQKQKVDPHYHTPKEAQKVPSLILKTLHEMKPIAANICESNKESEIGDDIMDIDNEDNPKPKDIRLGDISSIDIISPSFDADSKLDILISYAYENEASEITTTIYRYILADSQDLVSETFADLGMRKNVSASLSDEIKDYSLVLQDKLTRPGHIQRIETAVADSFIVLIYTRGEIDVIDRHNLQIVNNRSEIELKNTKDGDTPSTVSTMFDVGFNFPIIPVTDRSPIVIAVSPNLTSIAYTKINNKDQQLNLQVLEKNTNHGISPKELFVTSVGFAFRHSYACYTNSSADDLLALIQSEIKRVSGLLHKSVSDKKHNIETILNKFIESIICESHKAINFQLDAFGKESVDKLLSNPPLQKLLSLQLVLGELQNHDHIISDIAWIVLNLRSTSFGIMFSLSSIYRQISKKKPIDDSLQDSIARGECIMSLIGNVKWLIDLMVYFNQELLQLSYSKDDPSQSKLTMSNSTVLPVLISKVPRLFLIYALSSIGKTHEILKKLNEDLSESNKVFTPMKEALNRYFTICNQSPLNLGLFENFLRECDAFIIKEIGQKVEGKDKGYGLKIEQKLVCQGEITEEILPIAKALIQRHSAYVNRDMKVSELYFYDVDWIDIGIYKLNSNYPEAKFPSDQYPVIHKYPNTLKQVVPRLRFSDKECIDALRKIVISVDFDEGSKTTNLSKLRKCTRCRSFSLVNDPLVFDSPGNIGLWTMVFQRTCICGNAWVNCGK |
Length | 1037 |
Position | Tail |
Organism | Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes>
Saccharomycetales> Debaryomycetaceae> Debaryomyces.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.247 |
Instability index | 45.78 |
Isoelectric point | 6.26 |
Molecular weight | 116418.53 |
Publications | PubMed=15229592
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP25291
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 124.11| 40| 55| 655| 696| 2
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655- 696 (60.81/47.29) FGKESVDKLLS.NPPLQKLLSLQLVLGELQNhdHIISDIAWIV
708- 748 (63.30/41.95) FSLSSIYRQISkKKPIDDSLQDSIARGECIM..SLIGNVKWLI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.73| 17| 71| 123| 139| 9
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123- 139 (30.66/17.17) NKDANGSTSKNNGSSVP
192- 208 (30.08/16.71) NKPAVLTKVDNNSSSSP
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