<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25288

Description "Pb, isoform A"
SequenceMQEVCSTLDTTPMGTQIKSESPLNPLQVQTGGQTALPVGVGVGGLVGQGTQQGAPAVPAVMLVNKMASNCDKRAADTAYWMAASEGGFINSQPSMAEFLNHLSPESPKMGTPVGGGGGGGVGVGGGVNVNVNVGVGYPVGVGPMPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNNNPSAGSLTPNSSLETGISSNLLGSTTVSASNVISADSSVASSVSLDEDIEESSPIKVKKKDENQVIKKEAVSTSSKASPFGYESSTPSLVSFRRDSDAVIASANPPPTKGKKRYQNNANSIATPTPLTDSSSGGNVGAGGGGGASAGGYFPGYYPSPKQQMQQQQQLHPQQQQQQPQPQDYYGKYDIEFAASPHHNNPHKQQSLHAGEYLSPKPNAATFHQNSQQQQQHEQQFYYNYNDANGSAYMNHQQQQQQQHHHVGDFETPPINGPSNFNSGYYDNMSFQHQAQAQAHQQHQSVVFQQQQQHQQAPINHQQHMHHLGTGEAYSALGLQMENCDGYNNFGGPGSAGAGSAGAGVGVGYYEAGQQPPVPPHTHTHTHHPHHHVQVQAQAHDHLHAHHNPAAAAVQAGVGVGVGVGVGVGVVPPPPPPSHIHGFALNGGGQAVQSQAFVSGGGSAGGAAAISGLENSNSSSDFNFLSNLANDFAPEYYQLS
Length801
PositionKinase
OrganismDrosophila pseudoobscura pseudoobscura (Fruit fly)
KingdomMetazoa
Lineage
Aromaticity0.06
Grand average of hydropathy-0.777
Instability index55.23
Isoelectric point6.07
Molecular weight85156.75
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP25288
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     441.33|      78|      79|     477|     554|       1
---------------------------------------------------------------------------
  357-  412 (53.97/15.98)	..................DIE.ESSPIKVKKKDENQ....VIKKE.............A..VSTSSKA.SPFGYESS....TPSL..VSFRRDSDA.....VIASA.
  414-  479 (48.75/13.77)	........PPPTKGKKRYQNN.ANSIATPTPLTDSSsggnVGAGGgggasaggyfpgyY..PSPKQ.......QMQQ....QQQLHPQ...................
  480-  554 (136.43/51.02)	...QQQQQPQPQDYYGKYDIEFAASPHHNNPHKQQS....LHAGE.............Y..LSPKPNA.ATFHQNSQ....QQQQHEQQFYYNYND.....ANGSAY
  557-  635 (97.84/34.62)	HQQQQQQQ...HHHVG..DFE...TPPINGPSNFNS.......GY.............YdnMSFQHQAqAQAHQQHQsvvfQQQQQHQQAPINHQQhmhhlGTGEAY
  670-  711 (59.53/18.35)	YYEAGQQPPVPPHTH.....THTHHPHH...HVQVQ....AQAHD.............H..LHAHHNP.A.....................................
  735-  769 (44.80/12.09)	.......PPPPSHIH.......................................................GFALNGG....GQAVQSQAFVSGGGS.....AGGAA.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     142.20|      35|      78|      23|      81|       2
---------------------------------------------------------------------------
   23-   58 (62.77/22.43)	LNPLQVQtGGQTALPVGVGVGGLVGQG....TQQGAPAVP
   99-  122 (37.46/30.73)	LNHLSPE.SPKMGTPVGGGGGGGVG...............
  124-  155 (41.97/10.38)	........GGGVNVNVNVGVGYPVGVGpmpqTPDGMDSVP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.56|      13|      56|     657|     669|       3
---------------------------------------------------------------------------
  657-  669 (25.68/15.50)	AGAGSAGAGVGVG
  712-  724 (24.88/14.76)	AAAVQAGVGVGVG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.32|      19|      77|     159|     178|       4
---------------------------------------------------------------------------
  160-  178 (33.94/26.03)	MKEKK.TSRKSSNNNN....QGDN
  243-  266 (24.38/10.20)	MKHKRqTLSKTDDEDNkdslKGDD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.65|      13|      16|     274|     286|       5
---------------------------------------------------------------------------
  274-  286 (24.31/12.97)	NSKKSCQG..CELPS
  291-  305 (17.34/ 6.97)	DSTSNSRGhnNNTPS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.80|      15|      25|     182|     196|       6
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  182-  196 (27.89/19.34)	EFVPENGL..PRRLRTA
  208-  224 (23.91/15.50)	EFHFNKYLcrPRRIEIA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP25288 with Med12 domain of Kingdom Metazoa
Unable to open file!