Description | GD17845 |
Sequence | MHSPHILETLSGSAIFASKIDDLANTDSDTVTSDPSHDSNKSQEIKECTSLDSNSNSVQSLPLANNRENLIPKNVNDITTQLMHLIHSLNSPLSIIEIERVYQEKIIPCTCIVIEEVEGTLGESNNCTLDDQSKNAKISLNSKDNLFCHNQDNFPTSQRSINGEVIDTQPKLVKSIFDLDFDDNDDPLNLIMDEIQKPIARAEELKNNKSDTKNIHFGASAQNVSFNINFSDDAQQDNSNQEREKSETQNAIPAFTVHEDPDCLARQRFYIQTNKVTSFHINALHNYYIPNINGNWDSVESFTSFQPKHTIMDTMESYTVTNGADVVPKYGLLTSDRIRKDLSSLKSIKPYRVKKFTSLFSPFLGVAKCLPTCRRARRRLKNFVTLSTANDNTAKNFESLENMKASFKNCNPLNVKIDGTTSAIYSHNENHVPMQVNTNVEQLPPSQSFSGNAISYNLLKLADDKVRDDEISDKSSNHGCQENSPYSSSSSSGYSDSKEDQHNIIKNQQNKSIQLNSRNSDMNRRKRRIYLEDDSKKKKHYRKRIKAAVNGTCSNLHRNLNSSDSENGMENDYKNEYGNSNNEEYAIVQRPAGDGENCRNHIVLTIKKTPSKINSPANSMNAFSPSSTSDAANLKKSILDFCLEDTNISQSITEIPQKKKEDLSKSNRIVHQSRCSAYRRIFRKSDKSQTKFIDLELKHLFHLKSNPPCILANSKLHNKLFFPHELSMDNTSGIRERIINYSSSSSSSYDDDSEVENTSFVKKANVKKCSAYNNHNLKTETETCAATAISEFKFESDEDSMLTSLGDSDIDIQDEIHATNDSVDYCNDFQNNKMLESFNSIFVDSLRTNTKNESGNMESSPHITSLESLKPENVDAISRYCNNNNLGVNLSNELSNTSAKSIKSLDSTEKLPSLGNEHCTGIKTSSDLASTSIADKKLTRIQQFKEWHQVLQLKSYNNEPLIVLPYVLLE |
Length | 970 |
Position | Unknown |
Organism | Drosophila simulans (Fruit fly) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Ephydroidea> Drosophilidae> Drosophila> Sophophora. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.770 |
Instability index | 44.49 |
Isoelectric point | 5.91 |
Molecular weight | 109174.73 |
Publications | PubMed=17994087 |
Annotated function |
|
GO - Cellular Component | core mediator complex GO:0070847 IEA:EnsemblMetazoa mediator complex GO:0016592 IEA:InterPro nucleolus GO:0005730 IEA:EnsemblMetazoa pericentric heterochromatin GO:0005721 IEA:EnsemblMetazoa polytene chromosome chromocenter GO:0005701 IEA:EnsemblMetazoa |
GO - Biological Function | |
GO - Biological Process | positive regulation of gene expression GO:0010628 IEA:EnsemblMetazoa regulation of transcription by RNA polymerase II GO:0006357 IEA:EnsemblMetazoa |
Binary Interactions |
Repeats | >MDP25274 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 868.30| 242| 254| 266| 511| 1 --------------------------------------------------------------------------- 266- 472 (308.41/168.96) ............................................................R..QRFYIQTNKVTSFH....INALHNYYI...PNINGNWDSVESFTSFQPKHTIM..DTMESYTVTN.GADVVPKYGLLTSDRIRKDLSSLKSIKPYRVK...KFTS.LFSPFLGVAKCLPTCRRARRRL.KNFVTLSTANDNTAKNFESL.ENMKASFKNCNPLNVKIDGTTSA...IYSHN........ENHVPMQVNT.NVEQLPPSQSfSGNAISYNlLKLADDKVRDDEIS 473- 727 (320.51/174.17) DKSSnhGCQEN.SPYSSSSSSGYSDSKE.DQHNIIKNQQNK.....siqlnsrnsdmnrrK..RRIYLEDDSKKKKHyrkrIKAAVNGTC...SNLHRNLNSSDS.......ENGMenDYKNEYGNSN.NEE....YAIV..QRPAGDGENCRNHIVLTIK...KTPSkINSPANSMNAFSPSSTSDAANLkKSILDFCLEDTNISQSITEIpQKKKEDLSKSN..RIVHQSRCSAyrrIFRKS........DKSQTKFIDL.ELKHLFHLKS.NPPCILAN.SKLHNKLFFPHELS 729- 961 (239.38/123.84) DNTS..GIRERiINYSSSSSSSYDDDSEvENTSFVKKANVKkcsaynnhnlktetetcaaTaiSEFKFESDEDS..M....LTSLGDSDIdiqDEIHATNDSVDYCNDFQNNK.ML..ESFNSIFVDSlRTNTKNESGNMESS...PHITSLESLKPENVDaisRYCN...NNNLGVNLSNELSNTSAKSI.KSL.......DSTEK.LPSL.GN.....EHCTGIKTSSDLASTS...IADKKltriqqfkEWHQVLQLKSyNNEPL............................. --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 103.67| 31| 87| 115| 153| 2 --------------------------------------------------------------------------- 44- 77 (47.93/23.71) EIKECTSLDSNSNSVQSLplaNNRENLIPKNVND 123- 153 (55.74/27.76) ESNNCTLDDQSKNAKISL...NSKDNLFCHNQDN --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) AYRRIFRK 2) GIRERIINYSS 3) HYRKRIKA 4) RIYLE | 677 733 540 528 | 684 743 547 532 |
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