<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25232

Description Uncharacterized protein
SequenceMEEQLLKPASATVDPILVEKQKALLLTTTTTVGSIISSHCIDDASNSSSSIIEDIDVSNTSSTSSASSTSSNSSTSSSSSSSSAGSSLAGSGLGTDSDTGKGSSTLGSLDVASVSSSSINSALSTSGSGIGGGLSGIATITSMTATSGPLITVNSNSSSSSSGLGLDLVVDVDSSLTSNSSQELNNTHGSVVGVGITSDLDSLEDSCGGLIKEDDKICKLCSSRLVMPRILSCLHVFCEDCLQQQLLVSSKDTTIAASSPTSCSSSSFDGSEHQQQQQQRMHPLLMLLDCPTCKQTTQLGPKGVKGLTCDYIVTNILDLSNLESEQIPCTSCKSKEEAISRCNDCANFLCNGCDNAHKYMRCFENHQVVRIEDLQKNVHDKLIIHKPVCCRQHITENLKYYCFTCQMPTCNDCLLSDHKGNDHHYETAIVAEQAVRADLEQTITETLNRAQYCNDAGGNLSSALTELQSQHDNVRQQIDDAYKVYKRMLEIIKEQMLDELGRLHSERELKIMDLMQGLENNMGRLQQAAQYGQRAMEKANAIELLLLKPVISAQCRNLVEHTPKCDVNYQLKFDTKPEKFEQYARDLFGKFRTETTSTVAATVQQQQHQQQQQQQQQQQQQQQQQQQQQQHHQSKQQLSHHHQQQQQQQQQLQQQQQQQQHSGNNGMVNSGSSSVQGRLNTAAVYSPVSLPSSLQSSFDGGDNVANAAMTNFSTMMGNQQDSPPHQQQQLQRQQQEKQQQQVVLHQQHQQQQQQQQQQQQQQNQQLGQLVVQQQAAAAAAAAAAHVNLNLNSLSGAGGNVAGGGGGSGAGGNGGSVVPPPAFSMLEYNISRLASLTENMPDTLGDALAVGGAVPAGQVIAGGNASSSVVSVQQQTQQQQQQQAVIPASAVTPTQPITLADILSGDQRAINNFQALAKLGLNNNDDLLSSGSSSGIDFLSDFCLPAATSPSLQSLNPIVGGGVVGVEDLGLNNFHAVATPGTTSVVTGRNKATPMQIRCKFGSLGTAKGQFNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGALKFQFGVAGKEEGQLWYPRKVAVMHNNGKFVVCDRGNERSRMQIFSKCGHFMRKIAIRYIDIVAGLAVTAKGHIVAVDSVSPTVFVISEEGELVRWFDCSDYMREPSDIAIRDNDFYVCDFKGHCVAVFQDDGTFLYRIGNEKVTCFPNGIDISNAGDVLIGDSHGNRFHVACYSREGALQSEFECPHVKVSRCCGLKITSEGYVVTLAKNNHHVLVLNTLYVH
Length1266
PositionTail
OrganismDrosophila willistoni (Fruit fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Ephydroidea> Drosophilidae> Drosophila> Sophophora.
Aromaticity0.05
Grand average of hydropathy-0.390
Instability index51.76
Isoelectric point5.62
Molecular weight136637.77
Publications
PubMed=17994087

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
zinc ion binding	GO:0008270	IEA:InterPro

GO - Biological Process
germ cell development	GO:0007281	IEA:EnsemblMetazoa
meiotic cell cycle	GO:0051321	IEA:EnsemblMetazoa









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP25232
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     174.95|      27|      31|     605|     631|       1
---------------------------------------------------------------------------
  605-  620 (28.00/ 6.99)	..............QQQHQQQQQQQQQQQQ
  621-  650 (47.59/16.22)	QQQQQQQQQQHhqsKQQLSHHHQQQQQQQQ
  711-  737 (44.99/14.99)	NFSTMMGNQQD...SPPHQQQQLQRQQQEK
  738-  764 (54.38/19.42)	QQQQVVLHQQH...QQQQQQQQQQQQQQNQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     196.84|      33|      33|      60|      92|       2
---------------------------------------------------------------------------
   45-   77 (43.55/18.78)	SNSSSSIIEDIDVS.......nT.........SS.TSSASSTSSNSSTSS
   78-  112 (40.30/16.87)	SSSSSSAGSSLAGSG.....lgT.........DSdTGKGSSTLG.SLDVA
  113-  154 (38.83/16.00)	SVSSSSINSALSTSG.......SgiggglsgiAT.ITSMTATSGPLITVN
  155-  190 (37.79/15.39)	SNSSSS..SS..GLGldlvvdvD.........SS.LTSNSSQELNNTHGS
  928-  955 (36.37/14.56)	SSGSSSGIDFLSDFC.......L.........PA.ATSPSLQSLN.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     206.03|      45|      49|     994|    1041|       3
---------------------------------------------------------------------------
  994- 1036 (54.18/40.54)	........MQirCkFGSLGTAK.GQFNSP......H...GFCLG....VDEEIIVADTNNH..RIEV
 1037- 1086 (52.94/29.59)	FDKMGalkFQ....FGVAGKEE.GQLWYPrkvavmH...N.........NGKFVVCDRGNErsRMQI
 1171- 1213 (53.89/30.26)	FQDDGtflYR.......IGNEKvTCF..P......N...GIDIS....NAGDVLIGDSHGN..RFHV
 1215- 1259 (45.03/23.45)	............C.YSREGALQ.SEFECP......HvkvSRCCGlkitSEGYVVTLAKNNH..HVLV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.19|      21|      49|     797|     817|       4
---------------------------------------------------------------------------
  797-  817 (40.97/19.70)	GGNVAGGG....GGSGAGGNGGSVV
  844-  868 (33.22/14.66)	GDALAVGGavpaGQVIAGGNASSSV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     177.32|      45|     109|     193|     241|       7
---------------------------------------------------------------------------
  193-  237 (75.95/33.27)	GVGITSDLDSLEDSCGGLIKEDDKI........CKLC..SSR.LVMP...RILSCLHVF
  257-  313 (59.87/27.36)	ASSPTSCSSSSFDGSEHQQQQQQRMhpllmlldCPTCkqTTQ.LG.PkgvKGLTCDYIV
  318-  349 (41.50/15.79)	......DLSNLE........SEQIP........CTSC..KSKeEAIS...RCNDCANFL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.79|      11|      48|     392|     402|      13
---------------------------------------------------------------------------
  392-  402 (23.39/15.43)	QHITENLK..YYC
  441-  453 (17.40/ 9.59)	QTITETLNraQYC
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP25232 with Med23 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) IEDIDVSNTSSTSSASSTSSNSSTSSSSSSSSAGSSLAGSGLGTDSDTGKG
2) NSLSGAGGNVAGGGGGSGAGGNGGSVVPPP
3) TVAATVQQQQHQQQQQQQQQQQQQQQQQQQQQQHHQSKQQLSHHHQQQQQQQQQLQQQQQQQQHSGNNGMVNSGSSSVQGRLNTAAVYSPVSLPSSLQSSFDGGDNVANAAMTNFSTMMGNQQDSPPHQQQQLQRQQQEKQQQQVVLHQQHQQQQQQQQQQQQQQNQQLGQ
52
791
598
102
820
768










Molecular Recognition Features






MoRF SequenceStartStop




NANANA