<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>
Description
Uncharacterized protein Sequence MDLDTQIIDSVNNFLKVDSIDEAFLSVIVFKPNGEQTKAQSFTNDFVTAFGQVPQENRDQVLRVYLLRTASASHCHMKVLMNALVKLVDAHHITARALCDKVLSCEKLEYEHKIFWIESFRLIKKVIVHVDYKGVREIMKVCRDKTQWFPLNVNVAYLPQLLAVEEIIRFIFDRNNCLLPAYFIANEIMRPFPYHWKLNKLMTDFVEEFRSTAQMVSIIGHAHMLPIVEHFGYADHMMNSWRLDHNTLKFTFKGSLPYEPELLEEQRLLLRYVLEQPYSREMVSQMLNLQKHQKQRYNALEEQLVNLIIHAMEMTEANDTLAGSGFNACDEQITPYEWVWLHLSSQLIYFVLFQFVSFMHIVLSLHEKLSKLELRKGRDQLMWILLQFISGSIQKNPITNFLPVFRLFDLLYPEQEPLKLPDINKSSMVRHMAPICVWIHLMKKARVENMNITRPLPIALKNHYDFLQHLVTPNTLMNMSLGSDFRIILICNAYSTNQEYFGRPMSILLDALNGNSKSANGAQIPAVTFSVAVLDSLTVHSKMSLIHSFVTQMLKQAQNKSQVPAAALLETYARLLVYTEIESLGIKGFLSQLMPTVFKNHAWAMLHTLMEMFSYRLHHVPTHYRVQLLSLLHSLSSLPQTNKMQLNLCFESTALRLITSISSAEFQPQFSRYFNEKSPGAVASNESEELNRVLILTLARSMHVHGGGDELQGWCKDFLSNIMQHTPHSWPLQSLTCFPPALNEYFAQNNQPSENKQVLKKSVEEEYRMWTSMSNENDIIAHFLRPNANPLFLCLLFKIIWETENISPVAYKILEQISARALSTLLRKFCDYLVVEVASFSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLLLKASELRNRVQEFCKDNNPDHWKQSNWQDKHLSFHQKYPEKFALDESASQIPLPVYFSNVCLRFLPVLDVVVHRFIELTIPNVHQILGYILDHLSILYKFHDRPITYLYNTLHYYERILRDRPSLKKKLVSTITSAFSEIRPPNWSITEPYKVFLQNQDLLWTPELGYYMNLIRRLADTISGKNVFYTTDWRFNEFPNAPAHALYVTCVELLGLPVAPSLVANNIIDVIVNGYAVIPQKEIHSYINAVGIVLAALPEPYWSGIYDRLQDMLNTPNMLKWTYRFNAFDMFNFKTVREAMLEKSYAVVLAVAHAVFHHMGVFKLAAMVRYIKEKLKPCVRTEQQLLYLCHVFGPFLQRIEMEKPNAVAGIGILLYEILEVVDKQHGPKPLQYMDQICDFLYHIKYIYVGNIIRNESEAIIKRLRPQLQMRLRFITHLNVEDIHTEKSVENNQQQQQQLQQQHQQQQQQQQQQQQQQQQQQQQLNQQQQQQMFMQHMQQQQHMQNIGMRHN Length 1402 Position Tail Organism Drosophila willistoni (Fruit fly) Kingdom Metazoa Lineage Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota>
Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Ephydroidea>
Drosophilidae> Drosophila> Sophophora.
Aromaticity 0.10 Grand average of hydropathy -0.149 Instability index 44.89 Isoelectric point 7.65 Molecular weight 163616.81 Publications PubMed=17994087
Function
Annotated function
GO - Cellular Component nucleus GO:0005634 IEA:UniProtKB-SubCell
GO - Biological Function GO - Biological Process
Interaction
Repeat regions
Repeats
>MDP25209
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 80.56| 15| 16| 1351| 1365| 1
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1351- 1365 (33.61/17.81) QQQHQQQQ..QQQQQQQ
1367- 1383 (27.30/13.17) QQQQQQQQlnQQQQQQM
1384- 1395 (19.64/ 7.54) FMQHMQQQ..QHMQ...
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.65| 14| 20| 257| 276| 2
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257- 271 (20.60/24.56) PYEPELLeEQRLLLR
277- 290 (26.04/10.22) PYSREMV.SQMLNLQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 59.78| 18| 20| 1154| 1172| 4
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1154- 1172 (30.27/25.16) WSGIYDRLqDMLN....TPNMLK
1173- 1194 (29.51/18.80) WTYRFNAF.DMFNfktvREAMLE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.60| 14| 20| 202| 215| 5
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202- 215 (25.17/17.28) MTDFVEEFRSTAQM
224- 237 (27.43/19.55) MLPIVEHFGYADHM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 58.02| 15| 18| 1080| 1097| 6
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1080- 1094 (31.09/26.20) FYTTDWRFNEFPNAP
1098- 1112 (26.93/12.33) LYVTCVELLGLPVAP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 41.09| 14| 19| 873| 886| 12
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873- 886 (25.31/14.66) LALRTHE.GNEAQ.VC
893- 908 (15.78/ 6.73) LLLKASElRNRVQeFC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 112.50| 36| 75| 652| 692| 13
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652- 692 (55.74/48.71) STALRLITSissaeFQPQFSRYFNEKS.PG...AVASNESEELNR
729- 768 (56.76/38.09) SWPLQSLTC.....FPPALNEYFAQNNqPSenkQVLKKSVEEEYR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.39| 15| 28| 1255| 1269| 17
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1255- 1269 (25.94/16.27) KP.NAVAGIGILLYEI
1280- 1295 (26.45/16.74) KPlQYMDQICDFLYHI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 93.51| 28| 53| 383| 411| 18
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383- 411 (45.81/34.85) WILLqFISGSIQKNPITNFLPVF..RLFDLL
438- 467 (47.70/31.27) WIHL.MKKARVENMNITRPLPIAlkNHYDFL
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Explaination for Stockholm format The "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column. It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column. This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.#=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.
Alignment of MDP25209 with Med23 domain of Kingdom Metazoa
Intrinsically Disordered Regions
IDR Sequence Start Stop
1) TEKSVENNQQQQQQLQQQHQQQQQQQQQQQQQQQQQQQQLNQQQQQQMFMQHMQQQQHMQNIGMRHN 1336 1402
