<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25201

Description Uncharacterized protein
SequenceMEVDQLTLADVVFVIENSAINGAYLNELKTNYVLPTLEHFTQGSIDEREFLIAERYATLYGIVTYRTASNLLEPVCTTYGPFVQPQKVIETIERLPLVGGGMESHAHMAEGFAAAHGCFDEINEQRHILEQANLQRHCILICNSPPYQMSVNESWKYKGKSCEQLAALFNERKINLSIIAPRKMPVLFKLFMKADGDQPITTKNYAKNIRHLVLLKGYSLKERAPSPNSMAVAGTTAAQHQMGAPQQQVSSVQAMNNNPNGQQSSQVQNMPMDTTPVQQQPGGAPQQQQQVMNMNSIQQQQQAQQSGAGTQTGLMNAQQQQQMLQQQQQQQQQQQQQQQQQQQFVPNQMQNANFQQNVVPGQNRWMYPNQPGQRPAFMQTAGNNMPLQQNQNPNSALISRINAPPNQTVNSLQQQLQQQQQQQRLQMLNQQHFNQLQQQLAQQQQQQQQQQQQQQHPQQQVNANANANMLPNVSSAANVPALQQQAPPQQQQQAQQQQLQQQQQQQQQQQQQQQQQQQQQPQEQSSLREKIWTGVLEWSEKIKNDQQKIPHSLQCTVCTNIKDGEPEIKADNWPPKLLMQLMPKHLVGNIGGQFLKDSKMVVFRPTPGEALDSLAKMMTSGFAGCVHFSALHNAPACDIKVLILLYTADRNAFLGFIPNNQSMFVERLRKVIQQKQSHGNMQQQQQQMPPQQQMQQMLQQQQQGKSPMEIQQQQQQMQQDNSQQQQPHYNQYAQLNMQMGGAPGGNGSGGIPMQPQMQMNMMQQQQQQQQQQRMPLGVPVANPNLQQQLQQQQQQVPQQQQQRMVRPMLGNNNPGLRQLLQHQTTGNQFRPQMGGQPNQMGAGGPMVGNRNFDDGGYEFM
Length860
PositionUnknown
OrganismDrosophila virilis (Fruit fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Ephydroidea> Drosophilidae> Drosophila.
Aromaticity0.05
Grand average of hydropathy-0.921
Instability index72.21
Isoelectric point8.80
Molecular weight97614.71
Publications
PubMed=17994087

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP25201
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     999.28|     165|     174|     235|     405|       1
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   74-  227 (129.60/19.58)	......................................PVCTTYGPFVQPQKVIETIERLPLVGGGMESHAHMAEGFAAAHGCFDEI..NEQRHILEQANL.......QRH.....................CILICN...SPP......YQMSV...NESWKYKGKSCEQLAalfnerkinlsiiaprkmpvlfklFMKADGDQPI...........TTKNY......AKNirhlvllkgYSLKER..APsP
  238-  405 (308.52/63.76)	AQhQMGAPQQQVSSVQAMNNNPNGQQSSQVQNMPMDTTPVQQQPGGAPQQQQQVMNMNSIQQQQQAQQSGAGTQTGLMNAQQQQQMLQQQQQQQQQQQQQQ.......QQQ.....................QQFVPNQMQNAN......FQQNVVPGQNRWMYPNQPGQRPA........................FMQTAGNNMP...........LQQNQ......NPN.........SALISRinAP.P
  406-  482 (105.61/14.12)	..................................................NQTV...NSLQQQLQQQQQQQRLQ..MLNQQHFNQ.LQQQLAQQQQQQQQQ.......QQQ.....................QQH.PQQQVNAN......ANAN........MLPN................................VSSAA.NVP...................................AL.........
  483-  613 (107.75/14.59)	..................................................QQQ....APPQQQQQAQQQ....Q..L.QQQQQQQQ.QQQQQQQQQQQQQP.......QEQsslrekiwtgvlewsekikndQQKIPHSLQ.CT......VCTNIKDGEPEIKADNWPPK..L........................LMQL....MPkhlvgniggqfLKDSKmvvfrpTPG.........EALDS.......
  615-  738 (189.31/31.75)	AK.MMTSGFAGCVHFSALHNAPACDIKVLILLYTADRNAFL...GFIPNNQS..MFVERLRKVIQQKQSHGNMQ......QQQQQMPPQQQMQQMLQQQQQgkspmeiQQQ.....................QQ....QMQQDN......SQQQ.QPHYNQ..Y.....................................AQLNM.............Q.................................
  739-  851 (158.49/25.76)	..................................MGGAPGGNGSGGIPMQPQ..MQMNMMQQQQQQQQQQR.MPLGVPVANPN...LQQQLQQQQQQVPQQ.......QQQ.....................RMVRP.MLGNNNpglrqlLQHQTTGNQFR...P.QMGGQPN........................QMGAGG...P...........MVGNR......N.......................
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP25201 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) APSPNSMAVAGTTAAQHQMGAPQQQVSSVQAMNNNPNGQQSSQVQNMPMDTTPVQQQPGGAPQQQQQVMNMNSIQQQQQAQQSGAGTQTGLMNAQQQQQMLQQQQQQQQQQQQQQQQQQQFVPNQMQNANFQQNVVPGQNRWMYPNQPGQRPAFMQTAGNNMPLQQNQNPNSALISRINAPPNQTVNSLQQQ
2) QQQQQQQQQQQQHPQQQVNANANANMLPNVSSAANVPALQQQAPPQQQQQAQQQQLQQQQQQQQQQQQQQQQQQQQQPQEQSS
3) RLRKVIQQKQSHGNMQQQQQQMPPQQQMQQMLQQQQQGKSPMEIQQQQQQMQQDNSQQQQPHYNQYAQLNMQMGGAPGGNGSGGIPMQPQMQMNMMQQQQQQQQQQRMPLGVPVANPNLQQQLQQQQQQVPQQQQQRMVRPMLGNNNPGLRQLLQHQTTGNQFRPQMGGQPNQMGAGGPMVGNRNFDDGGYEFM
224
444
667
415
526
860










Molecular Recognition Features






MoRF SequenceStartStop




NANANA