<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP25152

Description Uncharacterized protein
SequenceMREKCTVNNKNMDTQILDAVNDFLKVDSLDEAFVSVIVFKSEDDKPTNFTNNLITAFGNVENREQVLRAYLLRAAEAPSYHMQVLMAALPKLVDAHHITARMLCDKVLSCEKLDYERKTFWIESFRLIKKVISHVDYKGVREIMKACREKAQWFPLNVNVTYLPQLLAVEEIIRFIFDRNNCLLPAYFIANEIMRPFPYHWKLNKLMTDFVEEFRATAQMVSIIGHANMLPIVEHFGYADHLMNSWRLDHNTLKFNFKGSLPYEPELLEDQTPLLRYVLEQPYSREMVSVMLNLQKHQKQRYNALEEQLVNLIIHAMEMTETNDATAGSGFNATDEQISHNEWVWLHLSSQLIYFVLFQFVSFMHIVLALHEKLSKLELRKGRDQLMWILLQFISGSIQKNPITNFLPVFRLFDLLYPEQEPLKLPDYNKSSLVRHMAPICIWIHLMKKARVENMNITRPLPIALKNHHDFLQHLVAPNNMMNVTLGNDFRIILICNAYSTNQDYFARHMNVLLDAMNGNAKSANGTPIPAVTYSVSVLDSLTVHSKMSLIHSFVTQMLKQAQSKTLVPAPALIETYARLLVYTEIESLGIKGFLTQLLPTVFKNHAWAMLHTLMEMFSYRLHHVPTHYRVQLLSLLYSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQSQFSRYLNDKSPGGVASNESEELNRVLILTLARSMHVHGGGDELAGWCKDFLSNIMQHTPHSWPVQSLACFPHALNEYFLQNNHPVENKQQLKKSVEEEYRNWTSMSNENDIIAHFIRPNTNPLFLCLLFKIIWETESISPVAYKILEGISARALSTHLRKFCDYLVAEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRLVLCLALRTHEGNEAQVCLITIQLLLLKASELRNRVQEFCKDNNPDHWKQSNWHEKHLQFHQNYPEKFAPDESASQIPLPVYFSNVCLRFLPVLDVVVHRFIELTIPNVHQILGIILDHLSILYKFHDRPITYLYNTLHYYERILRDRLPLKKKLVSAITSAFSEIRPANWCVSEPYKVYLQSQDPLWTPDLSYYMNLIRRLADTISGKNVFYTTDWRFNEFPNAPTHALYVTCVELLGLPLAPSVVAGNIIDVIVSGYAVIPQKEIHSYINAVGIVLAALPEPYWSGIYDRLQDMLNTPNMLNWTYRFNAFELFNFKTVREAMLEKSYAVVLAVAHAVFHHMGAFKLAAMTRYIKEKLKPCVRTEHQLLYLCHVFGPFLQRIEQEKPNAVAGIAIFLYEMLENVDKHHGPKPLEYMDQICDFLYHIKYIHVGNIIKNESEAIIKKLRPQLQMRLRFITHLNLEDIHTEKIAEANANANANSTQSPLHTAQQQQQQQQQQQQQQQQPQQQQQQQQPQAPPVSAATTSLPLGSGGNTQQQMYLQHMQLQQQHMQNMGMRHN
Length1433
PositionTail
OrganismDrosophila mojavensis (Fruit fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Ephydroidea> Drosophilidae> Drosophila.
Aromaticity0.10
Grand average of hydropathy-0.175
Instability index42.59
Isoelectric point7.17
Molecular weight165845.71
Publications
PubMed=17994087

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP25152
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.81|      17|      35|    1374|    1390|       1
---------------------------------------------------------------------------
 1374- 1390 (35.80/20.44)	QQQQQQPQQQQQQQQPQ
 1410- 1426 (33.02/18.31)	QQQMYLQHMQLQQQHMQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.16|      20|      35|    1296|    1315|       2
---------------------------------------------------------------------------
 1296- 1315 (34.90/22.06)	FLYHIKY..IHVGNIIKNESEA
 1330- 1351 (28.26/16.48)	FITHLNLedIHTEKIAEANANA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      31.93|      10|      35|    1206|    1219|       3
---------------------------------------------------------------------------
 1206- 1219 ( 9.39/16.37)	LAVAHaVFhhmGAF
 1243- 1252 (22.54/11.96)	LYLCH.VF...GPF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.79|      16|      35|     422|     437|       4
---------------------------------------------------------------------------
  422-  437 (28.51/13.90)	PLKLPDYNKSSLVRHM
  460-  475 (29.28/14.45)	PLPIALKNHHDFLQHL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     118.07|      30|      35|     836|     865|       5
---------------------------------------------------------------------------
  836-  865 (53.52/35.44)	DYLVAEVA.SSSDGRDFIHK.CVDTINNMIWK
  872-  901 (41.81/26.07)	DRLVLCLAlRTHEGNE.AQV.CLITIQLLLLK
  903-  922 (22.73/10.80)	...........SELRNRVQEfCKDN.NPDHWK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      95.95|      35|      37|     542|     576|       6
---------------------------------------------------------------------------
  517-  557 (50.80/26.98)	MNGNAKSANGTPIPAVtysVSVldsLTVHSKM.SL.IHSFVTQ
  558-  597 (45.14/23.29)	MLKQAQSKTLVPAPAL...IETyarLLVYTEIeSLgIKGFLTQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.47|      24|     374|     229|     263|       7
---------------------------------------------------------------------------
  183-  210 (40.48/20.85)	LLP..AYF.IANEIMRpfpyHWKL..NKLMTDF
  229-  257 (33.99/51.65)	MLPivEHFgYADHLMN....SWRLdhNTLKFNF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.58|      13|      15|     620|     634|       8
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  620-  632 (26.06/18.56)	YRLHHVPTHYRVQ
  638-  650 (23.52/ 9.17)	YSLSSVPQTNKMQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.28|      27|      37|    1096|    1126|       9
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 1096- 1126 (40.39/41.62)	PNAPTHAlYVTCVellGLPLA..PSVVAGNIID
 1136- 1164 (46.90/33.36)	PQKEIHS.YINAV...GIVLAalPEPYWSGIYD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP25152 with Med23 domain of Kingdom Metazoa
Unable to open file!